CI01000013_11453318_11457266 (GLIPR1B)


Basic Information

Item Value
gene id CI01000013_11453318_11457266
gene name GLIPR1B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11453113 ~ 11458060 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_11453318_11457266.mRNA
ATAACAGTTAATAAATATAAAAATAAAATGTGCCAATTTTTTTAAATGTATTAGGCTACCACAGACTGTAAAAAAAGTGTATTACACAGATTTCGTGTCTCATTTTTATACATATATTTTTAAAATCTAAATATTATCAAAAAATCATATAAAATACAAAATTAGCTACTTGAAGGACAGCATACTCAATAATTACATCAATTTATTATTAAATAAATCTATGATTAAAGGTAATATCCATTCCAATCGTTATTGTGTTAAACATTTACTAGCTTTGAATTCAAAATAATAATTATCATTAAGATCTTATTGTAAATACTCTTAAATGTCCGGCTAAATCTAACTAATATTTAGCTCAGCTGACATCTAAAATAAATTAACTAACTCTAAATGCATTTTTAAAATAAGCCTTCTAAATATGTACTAGCTAAATATGGCAGAATGGCCATTTTTGTAGCACGGCTTGTTTTACTTTTGGAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGGGCGTGCGCGTGAACTTGTGCGTGAGAGATGAAGACAAAGAGCCCCGCGCATCAAATTTTTTCGTGACATGGTGGGTGGTTCTGTTTCAGTCCTTTAAAAAGCCCCTGTACGAAGACAGACAGACAGATAGACAGAGAGAGAGATCGACAGACAGAGAGGGAGAGAGAGTGGGCAAATCCACGGCACCATGACGCACAGGTCAGCGCGTCTCCTGCAGTGATGCTCCATTGACTCATTTATCCAGAGCGAAGCAGCGCGGCTCAGGACAAGTCTCCTGCCATGGACTCTCTCGGCGGTCTTCTCTTACGGATATCGGTTCTTCTGTACGGCTCATTCGGCGTTCTGGCGCTCTTGCCGGGAATCACAGAACCGGAGTTCATCCGCAGGTGTGTGCAGGCGCATAACACGCACCGCTCGCGCGTCACTCCACCTGCGGTCAGTGCGCGCTCCATGTCCTGGGACAATGAATTGGCCAAAGGTGCCAGAGACCGGGCGAGACACTGCAAGGCCTCTCATCATCCTGGGCTAGCATATTTCGGGCACCCTCCATTCGGATGGATGGGCGAGAACATCTGGCTGGGGGCTCCGTTTTCAGCCTTCTCGGTGGAGAACGCCGTACACAGATGGAACAAAGAAGGAGTTTACTCACTCAAAAATAACAACTGCTCACGGATGTGCGGCCACTACGCACAGTTAATGTGGTCTACAAGCTTCAAGCTGGGCTGTGCTGTAAATGTGTGCTCTAAAGGAATCGAAAACTTCTCCACTCACCCAGAATCCACTATTTTTGTGTGCAACTATGGGGATACAGGACAAGTTCATGGTATTACTCCATATATAGCAGGTGTGGCCTGCAGCGGTTGTGGATCAGAGATCTGCCGAGACAACATCTGTAGATATGATTGGTTCCCTGGGTGGGACTATGGCCCGCCCTCTTCAGCCCCCAGTATTTCCTATTGGCTGACTAATCTTGGACTGTGTCTACTAGGAGTTTGCTGGCACTTTTATGCAACACATTAATGTCATCCAGTGTTATCTAATATCCTTAAAATTTGAATCTCCCCATCATTTATATACAGTTATATATTAAATTAGCAATCATTGAAATATGATGACATATACATATAGTTCCCTTTCTGCTGTGTGTAAATTATTTATTTTAGTGCCATATACACAGTAAGTCTGTAAATGCATTTGGCAATCATAAAAGTGCTAGTGAAATAAA

Function

symbol description
glipr1b Predicted to be active in extracellular space. Orthologous to several human genes including GLIPR1 (GLI pathogenesis related 1) and GLIPR1L1 (GLIPR1 like 1).

GO:

id name namespace
GO:0003674 molecular_function molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_11453318_11457266.mRNA True 1740 mRNA 0.42 5 11453113 11458060

Neighbor

gene id symbol gene type direction distance location
CI01000013_11438137_11444770 NA coding downstream 7945 11438065 ~ 11445168 (-)
CI01000013_11422924_11427360 SYT1 coding downstream 25753 11422719 ~ 11427360 (-)
CI01000013_11368665_11383592 NA coding downstream 69521 11368567 ~ 11383592 (-)
CI01000013_11343431_11351259 NA coding downstream 101302 11342573 ~ 11351811 (-)
CI01000013_11308893_11311699 ARF4A, ARF5, ARF4 coding downstream 141414 11307795 ~ 11311699 (-)
CI01000013_11468322_11475130 CERS3B coding upstream 10101 11468161 ~ 11475130 (-)
CI01000013_11480488_11512738 NA coding upstream 22428 11480488 ~ 11512738 (-)
CI01000013_11516609_11563528 VWF coding upstream 58231 11516291 ~ 11563528 (-)
CI01000013_11566351_11566887 NA coding upstream 108065 11566125 ~ 11566887 (-)
CI01000013_11596784_11604320 NA coding upstream 138628 11596688 ~ 11604865 (-)
G85585 NA non-coding downstream 16960 11435862 ~ 11436153 (-)
G85570 NA non-coding downstream 31822 11417265 ~ 11421291 (-)
G85569 NA non-coding downstream 37763 11413643 ~ 11415350 (-)
G85557 NA non-coding downstream 139128 11313773 ~ 11313985 (-)
G85445 NA non-coding downstream 149529 11300622 ~ 11303584 (-)
G85620 NA non-coding upstream 107072 11565132 ~ 11565506 (-)
G85632 NA non-coding upstream 135241 11593301 ~ 11595301 (-)
G85661 NA non-coding upstream 223123 11681183 ~ 11683033 (-)
G85676 NA non-coding upstream 248065 11706125 ~ 11706464 (-)
G85454 NA non-coding upstream 312689 11770749 ~ 11775434 (-)
G85401 NA other downstream 417647 11035032 ~ 11035466 (-)
G85188 NA other downstream 857776 10592204 ~ 10595337 (-)
CI01000013_10564288_10569141 NA other downstream 880673 10563459 ~ 10569290 (-)
G85170 NA other downstream 972413 10479861 ~ 10480700 (-)
CI01000013_09309438_09335834 MICAL3A other downstream 2130269 9307036 ~ 9336077 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012589 glipr1b coding NC_007129.7 CM002902.2 7345417 ~ 7355225 (+)