Gene
RNA
| Item | Value |
|---|---|
| gene id | G81078 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000013 |
| NCBI id | null |
| chromosome length | 12551977 |
| location | 4799204 ~ 4799470 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU92287 | True | 267 | lncRNA | 0.31 | 1 | 4799204 | 4799470 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000013_04781357_04784880 | HACD3 | coding | downstream | 14324 | 4781164 ~ 4784880 (-) |
| CI01000013_04760408_04771970 | SLC24A1 | coding | downstream | 26415 | 4760392 ~ 4772789 (-) |
| CI01000013_04710817_04715966 | RAB11B.1.S, RAB25, RAB11B.2.L, RAB11B.2, RAB11B.1, RAB11A, RAB11B, RAB11BA | coding | downstream | 83008 | 4710555 ~ 4716196 (-) |
| CI01000013_04639632_04646082 | NA | coding | downstream | 152203 | 4639362 ~ 4647001 (-) |
| CI01000013_04561253_04567647 | MAP2K1 | coding | downstream | 231557 | 4560340 ~ 4567647 (-) |
| CI01000013_04824249_04836061 | ARIH1 | coding | upstream | 24436 | 4823906 ~ 4836061 (-) |
| CI01000013_04843421_04845524 | NA | coding | upstream | 43540 | 4843010 ~ 4845524 (-) |
| CI01000013_04884419_04897842 | ST3GAL2 | coding | upstream | 83827 | 4883297 ~ 4897842 (-) |
| CI01000013_04980677_04981525 | SIAH1, SIAH1A | coding | upstream | 180008 | 4979478 ~ 4982148 (-) |
| CI01000013_05008046_05022184 | N4BP1 | coding | upstream | 208402 | 5007872 ~ 5022572 (-) |
| G81077 | NA | non-coding | downstream | 1283 | 4797565 ~ 4797921 (-) |
| G81076 | NA | non-coding | downstream | 5436 | 4792804 ~ 4793768 (-) |
| G81075 | NA | non-coding | downstream | 8164 | 4790469 ~ 4791040 (-) |
| G81045 | NA | non-coding | downstream | 70498 | 4721963 ~ 4728706 (-) |
| G80989 | NA | non-coding | downstream | 136551 | 4583227 ~ 4662653 (-) |
| G81081 | NA | non-coding | upstream | 53230 | 4852700 ~ 4860896 (-) |
| G81079 | NA | non-coding | upstream | 62276 | 4861746 ~ 4865271 (-) |
| G81047 | NA | non-coding | upstream | 129362 | 4928832 ~ 4932259 (-) |
| G81098 | NA | non-coding | upstream | 226034 | 5025504 ~ 5025931 (-) |
| G81108 | NA | non-coding | upstream | 237407 | 5036877 ~ 5037092 (-) |
| G81032 | NA | other | downstream | 48643 | 4748809 ~ 4750561 (-) |
| G80443 | NA | other | downstream | 733187 | 4064942 ~ 4066017 (-) |
| G80399 | NA | other | downstream | 892964 | 3904067 ~ 3906240 (-) |
| G80271 | NA | other | downstream | 1075597 | 3719433 ~ 3723607 (-) |
| G81547 | NA | other | upstream | 940056 | 5739526 ~ 5744038 (-) |
| CI01000013_05883498_05884071 | CHTF8 | other | upstream | 1082579 | 5882049 ~ 5884071 (-) |
| CI01000013_07339918_07367774 | NA | other | upstream | 2540239 | 7339709 ~ 7367774 (-) |
| CI01000013_09309438_09335834 | MICAL3A | other | upstream | 4507566 | 9307036 ~ 9336077 (-) |
| G85170 | NA | other | upstream | 5680391 | 10479861 ~ 10480700 (-) |
