G81098


Basic Information

Item Value
gene id G81098
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 5025504 ~ 5025931 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU92308
GACCAGGCAACGTTTTCCAATCTTCTATTGTCCAATTTTGGTGAGCCCTTGTGAATTGTAGCCTCAGTTTCCTGTTCTTAGCTGACAGGAGTGGCACCCAGTGAGGTTTTCTGATGCTGTAGCCCATCTGCTTCAAGGTTTGATATTTTGTGCGCTCAGAGATGCTCTTCTGCAGACCTCGGTTGTAACGAGTTTTTATTTGAGATAATGTTGCCTTTCTATCAGCTCGAACCAGTCTGGCCATTCTCCTCTGACCTCTGGCATCAACAAGGCATTTTTCCCCACAGAACAGCCTCTCACTGGAGATATTCTCTTTTTCGGACCATTCTCTGTAAACCCTTGTGCGTGAAAATCCCAGTAGATTAGCAGTTTCTGAAATACTGAAATACCATGCCATGTTCAGATTCACTTAAATCATCATTCTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92308 True 428 lncRNA 0.44 1 5025504 5025931

Neighbor

gene id symbol gene type direction distance location
CI01000013_05008046_05022184 N4BP1 coding downstream 2932 5007872 ~ 5022572 (-)
CI01000013_04980677_04981525 SIAH1, SIAH1A coding downstream 43356 4979478 ~ 4982148 (-)
CI01000013_04884419_04897842 ST3GAL2 coding downstream 127662 4883297 ~ 4897842 (-)
CI01000013_04843421_04845524 NA coding downstream 179980 4843010 ~ 4845524 (-)
CI01000013_04824249_04836061 ARIH1 coding downstream 189443 4823906 ~ 4836061 (-)
CI01000013_05168475_05174273 CBLN1.S, CBLN1 coding upstream 141674 5167605 ~ 5174273 (-)
CI01000013_05197841_05231302 TMEM189 coding upstream 171425 5197356 ~ 5231568 (-)
CI01000013_05233187_05234747 NA coding upstream 207141 5233072 ~ 5234840 (-)
CI01000013_05255572_05261556 ZNF423 coding upstream 229459 5255390 ~ 5261609 (-)
CI01000013_05318806_05354911 ZNF423 coding upstream 292875 5318806 ~ 5354911 (-)
G81047 NA non-coding downstream 93245 4928832 ~ 4932259 (-)
G81079 NA non-coding downstream 160233 4861746 ~ 4865271 (-)
G81081 NA non-coding downstream 164608 4852700 ~ 4860896 (-)
G81078 NA non-coding downstream 226034 4799204 ~ 4799470 (-)
G81077 NA non-coding downstream 227583 4797565 ~ 4797921 (-)
G81108 NA non-coding upstream 10946 5036877 ~ 5037092 (-)
G81109 NA non-coding upstream 11245 5037176 ~ 5037478 (-)
G81112 NA non-coding upstream 14125 5040056 ~ 5040289 (-)
G81121 NA non-coding upstream 29422 5055353 ~ 5055738 (-)
G81127 NA non-coding upstream 37256 5063187 ~ 5063406 (-)
G81032 NA other downstream 274943 4748809 ~ 4750561 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 466601 4560340 ~ 4567647 (-)
G80443 NA other downstream 959487 4064942 ~ 4066017 (-)
G80399 NA other downstream 1119264 3904067 ~ 3906240 (-)
G80271 NA other downstream 1301897 3719433 ~ 3723607 (-)
G81547 NA other upstream 713595 5739526 ~ 5744038 (-)
CI01000013_05883498_05884071 CHTF8 other upstream 856118 5882049 ~ 5884071 (-)
CI01000013_07339918_07367774 NA other upstream 2313778 7339709 ~ 7367774 (-)
CI01000013_09309438_09335834 MICAL3A other upstream 4281105 9307036 ~ 9336077 (-)
G85170 NA other upstream 5453930 10479861 ~ 10480700 (-)

Expression


Co-expression Network