G104296


Basic Information

Item Value
gene id G104296
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 3826788 ~ 3827212 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU118612
GTTGATTCCCTAAAAAGTACTGGTTCATAAGAGTCCTTTGCTTGTGAATTGGACTCCACTGGTTGTTCTGTTTGTTGTTGACTCACTAAAAAGAACAGATTCATCAGTCATTTGCTTGTGAATCGGACTTCACTGGTCATGCTGTATGCTTTTTATTAACTAAAAAGAACCAGTTCATAAGAGTCATTTGCTTGTGAAACGGACTACAGTGCTTGCGCTGTATAGTTTTTATTCACTAAAAAGAATCATTTGCTTGTCAGTCCCACTACATTGATCATGTTATGTTTATTTTTGCATGCAGGCCGCAGGGACAACTTTATATAAAGATGTTTTTTGCCATTATATTGTGGTATAGTCTTTTTGTTGTACAATATGATTTCTTTTGCTGCGATTCTATTTATTCAGCCGCATTAGATGGTACACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118612 True 425 lncRNA 0.36 1 3826788 3827212

Neighbor

gene id symbol gene type direction distance location
CI01000018_03727066_03727226 NA coding upstream 99480 3727066 ~ 3727308 (+)
CI01000018_03714508_03725674 NA coding upstream 100858 3714508 ~ 3725930 (+)
CI01000018_03630815_03635622 NA coding upstream 191001 3630777 ~ 3635787 (+)
CI01000018_03513125_03558562 SLCO5A1 coding upstream 268068 3511362 ~ 3558720 (+)
CI01000018_03482157_03507502 SULF1 coding upstream 318322 3481433 ~ 3508466 (+)
CI01000018_03865690_03869961 NA coding downstream 38099 3865311 ~ 3870063 (+)
CI01000018_03883336_03887135 ACAA1 coding downstream 55550 3882762 ~ 3887214 (+)
CI01000018_03923541_03939515 NA coding downstream 96329 3923541 ~ 3939670 (+)
CI01000018_03964459_03964818 NA coding downstream 136223 3963435 ~ 3964881 (+)
CI01000018_04007742_04017494 GARS coding downstream 180530 4007742 ~ 4017781 (+)
G104339 NA non-coding upstream 5329 3821071 ~ 3821459 (+)
G104338 NA non-coding upstream 8111 3818388 ~ 3818677 (+)
G104337 NA non-coding upstream 9756 3815512 ~ 3817032 (+)
G104336 NA non-coding upstream 14251 3811838 ~ 3812537 (+)
G104257 NA non-coding upstream 136342 3690163 ~ 3690446 (+)
G104290 NA non-coding downstream 153 3827365 ~ 3827572 (+)
G104294 NA non-coding downstream 1185 3828397 ~ 3829136 (+)
G104340 NA non-coding downstream 3271 3830483 ~ 3831618 (+)
G104291 NA non-coding downstream 51836 3879048 ~ 3902148 (+)
G104381 NA non-coding downstream 132319 3959531 ~ 3959746 (+)
G104258 NA other upstream 135269 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 1841477 1924489 ~ 1985311 (+)
G102895 NA other upstream 2241126 1582913 ~ 1585662 (+)
CI01000018_04368179_04375192 NA other downstream 542974 4368179 ~ 4375866 (+)
G104670 NA other downstream 928589 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 1389468 5216452 ~ 5222616 (+)
G106429 NA other downstream 3054399 6881611 ~ 6886325 (+)

Expression


Co-expression Network