G117308


Basic Information

Item Value
gene id G117308
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 3376722 ~ 3376972 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU133302
CGCCTTCAGTGATAACAAACGCAGACTTTAACACACATATCCATGAAAATATGCATGTGCGGTTTTAAAAAGACTGCTCTAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATCAATTTCCAAGTAACTTTCACTTTGTTTTCCAGGGTAATTTTTGTTTTATGATGTTTATCTTGTAGATATATATATGTTCATCTAAGCATGTAATCAAAACTTATTCTTGTAAACTTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133302 True 251 lncRNA 0.30 1 3376722 3376972

Neighbor

gene id symbol gene type direction distance location
CI01000021_03349081_03350266 NA coding upstream 25542 3349081 ~ 3351180 (+)
CI01000021_03164405_03179692 FOXP1A coding upstream 196773 3164405 ~ 3179949 (+)
CI01000021_03119361_03125084 EIF4E3 coding upstream 249941 3119361 ~ 3126781 (+)
CI01000021_03101146_03115161 RYBPA coding upstream 261254 3100953 ~ 3115468 (+)
CI01000021_03044076_03086657 NA coding upstream 290065 3044076 ~ 3086657 (+)
CI01000021_03382666_03386768 S1, KRT8, E3, KRT4 coding downstream 3797 3380769 ~ 3386900 (+)
CI01000021_03428718_03432817 NA coding downstream 51604 3428576 ~ 3433102 (+)
CI01000021_03510302_03551418 PLXNB1A coding downstream 133276 3510248 ~ 3551572 (+)
CI01000021_03562381_03570309 NA coding downstream 185315 3562287 ~ 3571272 (+)
CI01000021_03594629_03615777 PRKCBP1L coding downstream 217657 3594629 ~ 3616329 (+)
G117306 NA non-coding upstream 1411 3375046 ~ 3375311 (+)
G117303 NA non-coding upstream 8197 3368314 ~ 3368525 (+)
G117202 NA non-coding upstream 51852 3269144 ~ 3328233 (+)
G117211 NA non-coding upstream 53350 3320597 ~ 3323372 (+)
G117239 NA non-coding upstream 77441 3239335 ~ 3299281 (+)
G117346 NA non-coding downstream 34926 3411898 ~ 3417615 (+)
G117327 NA non-coding downstream 74243 3451215 ~ 3478399 (+)
G117365 NA non-coding downstream 135740 3512712 ~ 3513001 (+)
G117366 NA non-coding downstream 159397 3536369 ~ 3537382 (+)
G117329 NA non-coding downstream 307264 3684236 ~ 3686269 (+)
G117237 NA other upstream 133358 3237854 ~ 3243364 (+)
G116236 NA other upstream 1079527 2289817 ~ 2297195 (+)
CI01000021_01332646_01333910 NA other upstream 2042313 1331665 ~ 1333951 (+)
G115519 NA other upstream 2892758 480530 ~ 483964 (+)
G117484 NA other downstream 579174 3956146 ~ 3957752 (+)
G117493 NA other downstream 656028 4033000 ~ 4035676 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 1465761 4886337 ~ 4893474 (+)
G119701 NA other downstream 3423172 6800144 ~ 6860606 (+)

Expression


Co-expression Network