CI01000027_05437708_05440788


Basic Information

Item Value
gene id CI01000027_05437708_05440788
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5437612 ~ 5441871 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_05437708_05440788.mRNA
AAGCAGTGAGCAATAATGAACCCCCCTCTCCCCACAGTGACAAAGAAAGCAAAAGGGTATTGAAAAGATGAGCAATAATTAGCAAAAATATGACTCCTAAAAAGTGAATATAACTAGAATTCATGTTTATATTCCAAAACAAAAATGGAAAAATTAAAAGCAGATATAATTTTACAGTATTTGTATAGTAAAGCTCTGAGCTTGCCATGTAAACCATTACAAAAACATGAAGTGACTGCAGTACTTCAAAAGAAATATTTTAAATGGATCTGCCAGCCGACTCTGTTCTAATGTATTCTATATGATCATGCAATGTTTACAGTAACAAAACAATAACGCAACATCACCCATTCATTCAGTTCTTTCACTATTGTGATTCTCATGTTACTGTGTGAGTAGAGTCAGTTAAAGTACGGTCATTTAAAGGCTCGCTGTACTTACATGTCACACCATGTCCATGTGTCAGTGCTGAAATTTGCATGTGTATATCGAAAAGGAATGAACCATAAACACTGTAACCTGGTCACAGTGGCAATGGGGCGAAAGAGGTGATGCAGGCGACAGCAGATGGTCCTACAGCAAGGATAGTTCTCTCAAAAGGAGAAGATCCTGTCTGCGTGCAGGTATGAGAAAGGGGAGAAACAAAGTAGAAGAACCCAATGTAGTATTTCCCATTGACTCCTCACTGAAAGAAAAAGACTTAGTTCTGAATCCTTAGAATGCTGCTTTGCTTGTTTATATGAGTGATCTGCACCGATTGGGCAGATGCCTTCGTGGTGCCAGCCAATGAACAGCTGGCTATGGTCACATGGGTGGATCACAGAGGGAGAGCATGAGCAGGTTGGATGGAGGGATGGGGGATGGGGGATGGGGGAGGACAGGACCAAAAGATAATGATTTAAGAGATAGTCTATCTAGCTAAATCGCAGTGAAGTTGTGTTGATGTATTTTGGGCCCTGACAAGAGTCTGACATTTATTGTGAAAGGGAAAAGGTGTGACAGAGTGTGGAAACGTCGAGATCCAGTAGCATCGTTCTCCATCAAAGCAAAAGCCAGGGGTGTAGTCATTAGAATTCTGTTGTCATGGAAACCGGTTCAGTGTGGCCTGTCGGGCTGGTGCGGGACTCTGACTCTACCCTAGTCTTACACAATAAGAGCCTTGCAGCCTCTTCCTTTTACTCGCTCTTTCACTCCACTCTCATCCTCTGCTTTCTTGTCAAATTTGCTTACGTACTGCATGTCAAGGCCACGTCGGATAAGAGACGTGTACTTGATGCATCCCGTGAATCACAGCATGTTTGTATGGGGGGGCAGAATCTTAGATGGTTTTTGTTTATGATAGAGGTTAGACATCAGAGTGAGAAAGATTTGCTGCCAAGGTTCCTTCTTGTCATAGTGGTGATGGGATTGGTTCATGCTGGTTTCAGAGTGGCATGGATAACCAAAAAGGTCTTTATGGAATTTATCCATAGAGCGGTAATGCGTCTGCTCTGCATCTCAGAGTTGGGTTACATAAGTGCGTTTTACTTCTGGTCACTGCTCATGTATCCCAGTCCCTCTGCTGCTTTTGCTTAAACCGAAGCATTACATCAGTCTGCACTCCATCAGTCTTCTTGCTACAGGACAGAAAGTGACAGGAGTAGAATTTAAGATGTCACATCTCATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_05437708_05440788.mRNA True 1671 mRNA 0.42 3 5437612 5441871

Neighbor

gene id symbol gene type direction distance location
CI01000027_05413809_05434967 FXYD6L coding downstream 1374 5413798 ~ 5436238 (-)
CI01000027_05386030_05388420 NA coding downstream 48020 5385960 ~ 5389592 (-)
CI01000027_05371407_05382804 NA coding downstream 52985 5370611 ~ 5384627 (-)
CI01000027_05262810_05263280 NA coding downstream 173026 5262600 ~ 5264586 (-)
CI01000027_05215497_05251776 CADM4 coding downstream 185836 5214797 ~ 5251776 (-)
CI01000027_05447458_05450346 PON2, PON3.2, PON3.1 coding upstream 5553 5447424 ~ 5450461 (-)
CI01000027_05451531_05453277 NA coding upstream 9556 5451427 ~ 5453277 (-)
CI01000027_05475732_05478408 NA coding upstream 33803 5475674 ~ 5478629 (-)
CI01000027_05480283_05480708 NA coding upstream 37914 5479785 ~ 5480708 (-)
CI01000027_05503261_05508595 KCNN4 coding upstream 61390 5503261 ~ 5508595 (-)
G141656 NA non-coding downstream 26661 5410712 ~ 5410951 (-)
G141825 NA non-coding downstream 42898 5394487 ~ 5394714 (-)
G141824 NA non-coding downstream 43254 5393952 ~ 5394358 (-)
G141819 NA non-coding downstream 153062 5281291 ~ 5284550 (-)
G141834 NA non-coding upstream 33067 5474938 ~ 5475149 (-)
G141844 NA non-coding upstream 99557 5541428 ~ 5542004 (-)
G141851 NA non-coding upstream 112263 5554134 ~ 5554522 (-)
G141852 NA non-coding upstream 114336 5556207 ~ 5556474 (-)
G141853 NA non-coding upstream 115012 5556883 ~ 5557191 (-)
G141588 NA other downstream 236457 5108335 ~ 5201155 (-)
G141728 NA other downstream 559846 4877067 ~ 4877766 (-)
G141488 NA other downstream 928641 4507475 ~ 4508971 (-)
G141481 NA other downstream 1024802 4372247 ~ 4412810 (-)
CI01000027_03922380_03931033 NA other downstream 1512040 3922242 ~ 3931033 (-)
G141638 NA other upstream 1346756 6788627 ~ 6796707 (-)
G142203 NA other upstream 1699223 7141094 ~ 7143063 (-)
G142209 NA other upstream 1711752 7153623 ~ 7157998 (-)
G142299 NA other upstream 1997307 7439178 ~ 7440191 (-)

Expression


Co-expression Network