G141819


Basic Information

Item Value
gene id G141819
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5281291 ~ 5284550 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU161148
NNNNNCTTCACAAGCTTTAATGCTTTGAGTTGCTGGATGTCAAGATGTCAGTCAGAGCTTTTCTCTTAAAATGGATGAATTAAAGAGAATACCATATCCAAACATAGCCAACATATTGATTATATTGTTTACAGCTGCACTCAATAAATAAATGCACTTTAGGAACCTCTGTTCATGCAAAGTCTTTTTGTTCCACATAATTTGGTAGTATTATTATTTTTGAGCTTTTGAGAGAAGCTTCTTAAGGTTTGGCCAGTTTTCATAATGTAGAGAGTGTTCATTTATATGATAAATATAATAAATCAGAAAACTAGAGGTAAAATAAACCCTGCATAGGAGCTGACGTTTTTTTTTATATTATTATTATTCGTGCTTACGTGAAAGTGCAATAATGTAAAAAGAACATTCTCAAATGAAAACAGTTGATTTAATAATCGCAATTAGAATTTTGAGAAAAATAATCATGTTTATTAGTTTAATTATCATTGTGCAGCCCTACTTTAATGTAATTGTGACTTTCTAAAAATAATATAATTTTTTTTAAATGATTTTTTATAAATGTATTTTAAAATGGTCGTTATTTCTCAGTCAGGTAAACATTGTTTTTATTGCAATTATTGAAGTAAATTTTCAGAGAAAAAAAATAATTAAATGAACTGTTCTAGTCTAAATCGAATGCAGATCTGATATTTAGACACTGGTCCATTATTTTTGACATTTACAGACCTAATTATTGCATTCTTACTTGAGTTGGTACTTTATATCGCTACATCTTACTTTATCATCAACTTGCATTTTCCATTCTTAGAGAGGAGATTTGCAAATACAGAATGAGCAGCTATGTGACGGGGGCACATGTGAACCAATCACGTAGAGAGGCACTATGGGATGGGGGAGAGGTGACTGGAGGTCCGTGTTTTACAAATTGCCTCTAAAACCGAAGCAGGCAAAGGTTGAGTGAGAGATGTACAAACGAGAGAGAAGGCATCGGAGAGAGTACAGATTGCTCACAGCAAGAGATGTTCTCTTTGTACTCCAGATCGCAGCGCGGGTGTGTAGCTGCCTCTCCGACGGGCATCCCGCTGCCCGGTCCATCCCCGACGCCACGCGTGGGCAACAGCACTTTATCACCAGCGCACACACATGCTCGCAGTGTCTCAGCTTCCTGATGGTTCCGTTCCAGCCCTCCTGCTATCTCTCTGCAACCGAAAAACCCATCTAGTGGTATTGGCAATGCGCAACTCTATTCATTAAACAAAACAACTCAGACGCAGGGAGAGAATGAATCACAGCCTAACTACCGTGAGAGGTGAGGAATCACACTGTAAATGAAACGTGCGAGCGCTCCTGCTGGCTGTCTTCACGTCAGAGACGGGCTGAAGTCACACTGTGGTGGCTGACAGGTCACAGAGGCCACACATCACCCGGCACTAACCACCAGCCAGGTTAAACAAAGACTTGAATGCAGCGAGTACCCCTCAAATACATTAAAAGACACTAGCAGTACCTCCCATACTGTGTGTGCTGTCTTTTTCATCTCTCTCTCTGTTTGTCACCATCCTTTCCCTTTTGCTTTTGTCTTCTGAGCCTGTTTCCTCTTCTTGGCTCCTGTCGTTTCATTTGTTCCCACTAGAACGGATCTGGAGAGCTGACCGGGGGGCTTGGCGAACCGGCAGAGGAACCGCTGGCTCTGTAAACGCTCTTCACACTCGCCGAGATTAGAAGGCTAATCAGGAAGCCCTTTCTCAGGCACCTGCGAGCCCCCTCCGGTAGATTGGGTTGTTTGTTGTTAGTTAGCTCCACATTAAGGGAAGTTAACTGCAATTACATTTGCCTGCCTGCGGGGGTCAGCCAGGTTGCTCCTCATTAACTCCAACTTCTTTCAGTTGTTGTTTTTCCTCTCTCCTGCCTCTTTCTCAGTCTTTTCCCTTTTCTAGGTCACATCAGAGACAACAATTAGGGGGGAAAGAATAGGAGAGGGGTGGTAGGAGAGGAGAAACATCTTTTGTCTAGCATATTGCGGGAGAACACAATGGCATCAGTGTGCTCGAGACCGGAGAAGGACTTTCACGGCACACCAACCACCAGAGCGCGGGGCAACATGCTTATTCATCTTCGCTCTGGCGGTCGAGGGCTTTTGAATGGATGGAAGAGAATGTGGGAGGGCGGTTATAAAGGAGAAATATGTCAAAAATTTCAAGCTTTATTTCTTTGAGTCTCCGCGTCGGTTTGTCTATGTATGTGGGCGTATGTGTGATGTATAATTGTATGTGTGAATGCATGGCAGGACAGAGAACAATATGAACAATTTGGGCCTGACATCATCAGCAAGCTGCTTGTCAGAATAATCGAGACGCTTCAGATGCTTTCAGATGCAAAGACTATGGGCCAACAAACATAGACACTCACTGTGAGTGCAACATAAATGCAAATATCATTGATCGCAGAGTCACAGAGGAAGAAACTAGAGACACAAACACACTTGATTATTCATCTCCTTCATCTCTGGATGGTGACTCAACAATTACTCATCCGTGAGGCACCAAGTGTTGACGTGTAACCTGCTCACTGCTGCTGTTCATTCAAGATAAATCCTCTCAGTTAAGATACTGACCATCTTAAATGACCAGTTGACGCCATCATAGTACTGTTTTTTTAAAGTAAACTGGTTTACTATTACTTGCAACAGACAGCATCATCTATCTGAAACCAGCTGAGACGGTTGCATTGAAGCTGTCTAGGGTTTTTTTTTTGTTTTTGTATTTCTTCACCAGCTGTGAGCACTTGTGATGGCATGATAAATGATAAATACATGGTTCAGCAACTCTTCAAAGAGCTGAGTAGTAAAGCTCAAGATGGCCTCCGCTCAACCTTCTCTAATGAAAAGACCCGCAATTCAAGTCACAAGCATCTGTTGTGGTTTGTATTCTGGACCCCAGAATCAGATGCTGGTGTGTTGGTTAGTGATGGACTGATATGTCAGCCAGGCTGATTTTTGGCCCTTGTAGGACTACCAGAAGTGGTCCTTCTGCCTAATGCATTTTCCAAAATCTACTGACAACCTTGCCAATGGATAATGGACATTTGCTAATGTAAAAAAAAATATTAGTTTAATTTTTTTTTTTTTGGTTTACATGATGTACTTGCATATATNNNNNNNNNNNNNNNACACACATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161148 True 3179 lncRNA 0.41 2 5281291 5284550

Neighbor

gene id symbol gene type direction distance location
CI01000027_05262810_05263280 NA coding downstream 16705 5262600 ~ 5264586 (-)
CI01000027_05215497_05251776 CADM4 coding downstream 29515 5214797 ~ 5251776 (-)
CI01000027_05196462_05200451 RPS19, RPS19-PS4, RPS19.S, RPS19-PS6, RS19 coding downstream 80840 5196431 ~ 5200451 (-)
CI01000027_05110063_05126542 NA coding downstream 154749 5110063 ~ 5126542 (-)
CI01000027_05047401_05048081 NA coding downstream 233210 5047293 ~ 5048081 (-)
CI01000027_05371407_05382804 NA coding upstream 86061 5370611 ~ 5384627 (-)
CI01000027_05386030_05388420 NA coding upstream 101410 5385960 ~ 5389592 (-)
CI01000027_05413809_05434967 FXYD6L coding upstream 129248 5413798 ~ 5436238 (-)
CI01000027_05437708_05440788 NA coding upstream 153062 5437612 ~ 5441871 (-)
CI01000027_05447458_05450346 PON2, PON3.2, PON3.1 coding upstream 162874 5447424 ~ 5450461 (-)
G141818 NA non-coding downstream 147 5272086 ~ 5281144 (-)
G141588 NA non-coding downstream 80136 5108335 ~ 5201155 (-)
G141591 NA non-coding downstream 106709 5067086 ~ 5174582 (-)
G141597 NA non-coding downstream 198015 5081563 ~ 5083276 (-)
G141592 NA non-coding downstream 210461 5069436 ~ 5070830 (-)
G141824 NA non-coding upstream 109402 5393952 ~ 5394358 (-)
G141825 NA non-coding upstream 109937 5394487 ~ 5394714 (-)
G141656 NA non-coding upstream 126162 5410712 ~ 5410951 (-)
G141834 NA non-coding upstream 190388 5474938 ~ 5475149 (-)
G141728 NA other downstream 403525 4877067 ~ 4877766 (-)
G141488 NA other downstream 772320 4507475 ~ 4508971 (-)
G141481 NA other downstream 868481 4372247 ~ 4412810 (-)
CI01000027_03922380_03931033 NA other downstream 1355719 3922242 ~ 3931033 (-)
G141638 NA other upstream 1504077 6788627 ~ 6796707 (-)
G142203 NA other upstream 1856544 7141094 ~ 7143063 (-)
G142209 NA other upstream 1869073 7153623 ~ 7157998 (-)
G142299 NA other upstream 2154628 7439178 ~ 7440191 (-)

Expression


Co-expression Network