Gene
RNA
| Item | Value |
|---|---|
| gene id | G141825 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 5394487 ~ 5394714 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: signal-regulatory protein beta-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU161154 | True | 228 | lncRNA | 0.38 | 1 | 5394487 | 5394714 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_05386030_05388420 | NA | coding | downstream | 4895 | 5385960 ~ 5389592 (-) |
| CI01000027_05371407_05382804 | NA | coding | downstream | 9860 | 5370611 ~ 5384627 (-) |
| CI01000027_05262810_05263280 | NA | coding | downstream | 129901 | 5262600 ~ 5264586 (-) |
| CI01000027_05215497_05251776 | CADM4 | coding | downstream | 142711 | 5214797 ~ 5251776 (-) |
| CI01000027_05196462_05200451 | RPS19, RPS19-PS4, RPS19.S, RPS19-PS6, RS19 | coding | downstream | 194036 | 5196431 ~ 5200451 (-) |
| CI01000027_05413809_05434967 | FXYD6L | coding | upstream | 19084 | 5413798 ~ 5436238 (-) |
| CI01000027_05437708_05440788 | NA | coding | upstream | 42898 | 5437612 ~ 5441871 (-) |
| CI01000027_05447458_05450346 | PON2, PON3.2, PON3.1 | coding | upstream | 52710 | 5447424 ~ 5450461 (-) |
| CI01000027_05451531_05453277 | NA | coding | upstream | 56713 | 5451427 ~ 5453277 (-) |
| CI01000027_05475732_05478408 | NA | coding | upstream | 80960 | 5475674 ~ 5478629 (-) |
| G141824 | NA | non-coding | downstream | 129 | 5393952 ~ 5394358 (-) |
| G141819 | NA | non-coding | downstream | 109937 | 5281291 ~ 5284550 (-) |
| G141818 | NA | non-coding | downstream | 113343 | 5272086 ~ 5281144 (-) |
| G141588 | NA | non-coding | downstream | 193332 | 5108335 ~ 5201155 (-) |
| G141597 | NA | non-coding | downstream | 311211 | 5081563 ~ 5083276 (-) |
| G141656 | NA | non-coding | upstream | 15998 | 5410712 ~ 5410951 (-) |
| G141834 | NA | non-coding | upstream | 80224 | 5474938 ~ 5475149 (-) |
| G141844 | NA | non-coding | upstream | 146714 | 5541428 ~ 5542004 (-) |
| G141851 | NA | non-coding | upstream | 159420 | 5554134 ~ 5554522 (-) |
| G141728 | NA | other | downstream | 516721 | 4877067 ~ 4877766 (-) |
| G141488 | NA | other | downstream | 885516 | 4507475 ~ 4508971 (-) |
| G141481 | NA | other | downstream | 981677 | 4372247 ~ 4412810 (-) |
| CI01000027_03922380_03931033 | NA | other | downstream | 1468915 | 3922242 ~ 3931033 (-) |
| G141638 | NA | other | upstream | 1393913 | 6788627 ~ 6796707 (-) |
| G142203 | NA | other | upstream | 1746380 | 7141094 ~ 7143063 (-) |
| G142209 | NA | other | upstream | 1758909 | 7153623 ~ 7157998 (-) |
| G142299 | NA | other | upstream | 2044464 | 7439178 ~ 7440191 (-) |
