G141727


Basic Information

Item Value
gene id G141727
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4875221 ~ 4875663 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU161046
GAAGGACCGTGTGTGTTTTTCATGGGAGGGTAAAAGCTGTGTGATGACCTACAATGTGCTAGCTGTCTTAAATGTTTTGTTTCAGGGCTCAAAACAGTGTCAGCTGTTGCGATGCATCACTTGGATGCCACGAGCACTGGGAGCAACACCCATAAACACACACAGTAGCCTACTAGCGATTTGTGCCCTTTATTTTAGTATACTCATTTACCAATGGCAGTTAGCTTGCGTTTCCCTGTTCTTTTCACCGAGGCTTTCCTGCTACCCACACTTTTCCCTCACGTATTCCCTCTTCTCATTCATTCTTCTCTGAAGCATCGATCACCTCATTTACACGGTGTATAGACCAAACTAATATTTCATGTACACGCTGTGCGCTTGTTTGACATATCCGTCGAAATATTCGCGCGGACCCAGAGTATAATGACTTTTTTTTCTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161046 True 443 lncRNA 0.44 1 4875221 4875663

Neighbor

gene id symbol gene type direction distance location
CI01000027_04812648_04813272 NA coding downstream 61344 4812622 ~ 4813877 (-)
CI01000027_04750483_04762663 TRIM46, TRIM46A coding downstream 112558 4750320 ~ 4762663 (-)
CI01000027_04744526_04745444 NA coding downstream 128523 4744358 ~ 4746698 (-)
CI01000027_04603997_04606475 NA coding downstream 267427 4603444 ~ 4608289 (-)
CI01000027_04524446_04527464 NA coding downstream 347757 4523811 ~ 4527464 (-)
CI01000027_04988247_04994680 RPS27.1, RPS27, RPS27.2, RPS27.L, RPS27L coding upstream 112571 4988234 ~ 4994680 (-)
CI01000027_05037013_05040668 OSGIN2 coding upstream 159524 5035187 ~ 5040668 (-)
CI01000027_05047401_05048081 NA coding upstream 171630 5047293 ~ 5048081 (-)
CI01000027_05110063_05126542 NA coding upstream 234400 5110063 ~ 5126542 (-)
CI01000027_05196462_05200451 RPS19, RPS19-PS4, RPS19.S, RPS19-PS6, RS19 coding upstream 320786 5196431 ~ 5200451 (-)
G141650 NA non-coding downstream 1454 4873119 ~ 4873767 (-)
G141695 NA non-coding downstream 79482 4785854 ~ 4795739 (-)
G141601 NA non-coding downstream 97241 4774201 ~ 4777980 (-)
G141679 NA non-coding downstream 166226 4708788 ~ 4708995 (-)
G141490 NA non-coding downstream 237552 4630336 ~ 4637669 (-)
G141730 NA non-coding upstream 5780 4881443 ~ 4881655 (-)
G141731 NA non-coding upstream 8017 4883680 ~ 4883901 (-)
G141734 NA non-coding upstream 10324 4885987 ~ 4886187 (-)
G141768 NA non-coding upstream 131332 5006995 ~ 5009205 (-)
G141488 NA other downstream 366250 4507475 ~ 4508971 (-)
G141481 NA other downstream 462411 4372247 ~ 4412810 (-)
CI01000027_03922380_03931033 NA other downstream 949649 3922242 ~ 3931033 (-)
CI01000027_03787377_03788902 NA other downstream 1085999 3787377 ~ 3790279 (-)
G140118 NA other downstream 1290542 3509352 ~ 3584679 (-)
G141728 NA other upstream 1404 4877067 ~ 4877766 (-)
G141588 NA other upstream 232672 5108335 ~ 5201155 (-)
CI01000027_05447458_05450346 PON2, PON3.2, PON3.1 other upstream 573663 5447424 ~ 5450461 (-)
G141638 NA other upstream 1912964 6788627 ~ 6796707 (-)
G142203 NA other upstream 2265431 7141094 ~ 7143063 (-)

Expression


Co-expression Network