Gene
RNA
| Item | Value |
|---|---|
| gene id | G141679 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 4708788 ~ 4708995 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU160996 | True | 208 | lncRNA | 0.58 | 1 | 4708788 | 4708995 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_04603997_04606475 | NA | coding | downstream | 100994 | 4603444 ~ 4608289 (-) |
| CI01000027_04524446_04527464 | NA | coding | downstream | 181324 | 4523811 ~ 4527464 (-) |
| CI01000027_04464282_04466128 | NA | coding | downstream | 242531 | 4463735 ~ 4466257 (-) |
| CI01000027_04439446_04461699 | SHC1 | coding | downstream | 246584 | 4437640 ~ 4462204 (-) |
| CI01000027_04424958_04434987 | NA | coding | downstream | 273559 | 4424309 ~ 4435229 (-) |
| CI01000027_04744526_04745444 | NA | coding | upstream | 35363 | 4744358 ~ 4746698 (-) |
| CI01000027_04750483_04762663 | TRIM46, TRIM46A | coding | upstream | 41325 | 4750320 ~ 4762663 (-) |
| CI01000027_04812648_04813272 | NA | coding | upstream | 103627 | 4812622 ~ 4813877 (-) |
| CI01000027_04988247_04994680 | RPS27.1, RPS27, RPS27.2, RPS27.L, RPS27L | coding | upstream | 279239 | 4988234 ~ 4994680 (-) |
| CI01000027_05037013_05040668 | OSGIN2 | coding | upstream | 326192 | 5035187 ~ 5040668 (-) |
| G141490 | NA | non-coding | downstream | 71119 | 4630336 ~ 4637669 (-) |
| G141572 | NA | non-coding | downstream | 88947 | 4617006 ~ 4619841 (-) |
| G141539 | NA | non-coding | downstream | 198165 | 4510259 ~ 4510623 (-) |
| G141519 | NA | non-coding | downstream | 312384 | 4393403 ~ 4396404 (-) |
| G141601 | NA | non-coding | upstream | 65206 | 4774201 ~ 4777980 (-) |
| G141695 | NA | non-coding | upstream | 76859 | 4785854 ~ 4795739 (-) |
| G141650 | NA | non-coding | upstream | 164124 | 4873119 ~ 4873767 (-) |
| G141727 | NA | non-coding | upstream | 166226 | 4875221 ~ 4875663 (-) |
| G141730 | NA | non-coding | upstream | 172448 | 4881443 ~ 4881655 (-) |
| G141488 | NA | other | downstream | 199817 | 4507475 ~ 4508971 (-) |
| G141481 | NA | other | downstream | 295978 | 4372247 ~ 4412810 (-) |
| CI01000027_03922380_03931033 | NA | other | downstream | 783216 | 3922242 ~ 3931033 (-) |
| CI01000027_03787377_03788902 | NA | other | downstream | 919566 | 3787377 ~ 3790279 (-) |
| G140118 | NA | other | downstream | 1124109 | 3509352 ~ 3584679 (-) |
| G141728 | NA | other | upstream | 168072 | 4877067 ~ 4877766 (-) |
| G141588 | NA | other | upstream | 399340 | 5108335 ~ 5201155 (-) |
| CI01000027_05447458_05450346 | PON2, PON3.2, PON3.1 | other | upstream | 740331 | 5447424 ~ 5450461 (-) |
| G141638 | NA | other | upstream | 2079632 | 6788627 ~ 6796707 (-) |
| G142203 | NA | other | upstream | 2432099 | 7141094 ~ 7143063 (-) |
