CI01000027_04464282_04466128


Basic Information

Item Value
gene id CI01000027_04464282_04466128
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4463735 ~ 4466257 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_04464282_04466128.mRNA
ATAGATATCAGGATGACTTTTTAGTGTTTGCTAGTTCTGCTGTCTTTAGCCCAGAAGCGTGCACGAGTCTGTTTTAAGTGTGTGTGTGTGTGTGTGTACTCTTGAGCAATATTTGATTTCCTCATTGGAATGGCGCCACAACTGCGCTGTGTGCACATTCGGATTGCAAGTGTGTTGCAGTGTCCCAAGTTACGCTTTAAACTGGACTTTAAGTTCAATCTCGCCAGTGTTAGGAAAGAGTCGTGCCTTCAGACCTTACGAGGGTTCAAGGTTCTCCTAAACACTGTGCTACTTCTGTGCCATGTTGTGTTGACGTCAATAAAGTTCATGAGCAACTCTGAAATACAGTCAAGTCTAGGACACTTCTGTAACTGTTGGAGGTTACAAGACTGTTGCCTCTCTATCAGAGGTTTTCAAAGTGCTTTACACTGGGGAAGTGCATTGGTGCGGTTAAATTCGGTGTTTGACTTTGCTAAATGACATTTAGAGGGTAGGTTTTCACTCAGGAAGCAGATCTATAAAGAGCTGCTCCATCCAAGACTGTTTGCCTGATTTTGAGGTGTCATTTAGGCTAATGAGCGACTGATTGATTTTCCAGTTAGCATCTAATGAGCATATCTCTGGAGGCGGTACTTCAGATTTGGCCAATCGGGTCTCATTATCATCACCCTGACATTGCTGGAACGTGCTTGTTTTAGGAACATCATAGTTCCTTTGCAGCTGGATTGTCACACTTTAACTTCTTCACAGATAACACCAAACAATCAGTGGTTCTCTAAATGGTGCTCGAACCCATGTTGTCTTCTATACAGCCATATTTAACTTTGACTTAACTGTTTCAGGGTTTTCCGAGTCTAGTTTGTCCTTTTCTAAATCACATTTCTACAGGCTGTTGTTTATCAGGGTTAATTATCCGTGTATAATATAAAATTTGTTGTAGGTTTTTTTCTGGGTTTTTTCGATTCAGTGAATTATTGCGATTAATTTCAGATTGCAAAGAGGCTCAGGTGTTTTTTTAAGGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_04464282_04466128.mRNA True 1027 mRNA 0.41 4 4463735 4466257

Neighbor

gene id symbol gene type direction distance location
CI01000027_04439446_04461699 SHC1 coding downstream 1531 4437640 ~ 4462204 (-)
CI01000027_04424958_04434987 NA coding downstream 28506 4424309 ~ 4435229 (-)
CI01000027_04419264_04422151 NA coding downstream 41355 4418107 ~ 4422380 (-)
CI01000027_04401843_04403095 S100A11, S100T, S100S coding downstream 60640 4401490 ~ 4403095 (-)
CI01000027_04324807_04339354 NA coding downstream 124381 4324676 ~ 4339354 (-)
CI01000027_04524446_04527464 NA coding upstream 57554 4523811 ~ 4527464 (-)
CI01000027_04603997_04606475 NA coding upstream 137187 4603444 ~ 4608289 (-)
CI01000027_04744526_04745444 NA coding upstream 278101 4744358 ~ 4746698 (-)
CI01000027_04750483_04762663 TRIM46, TRIM46A coding upstream 284063 4750320 ~ 4762663 (-)
CI01000027_04812648_04813272 NA coding upstream 346365 4812622 ~ 4813877 (-)
G141519 NA non-coding downstream 67331 4393403 ~ 4396404 (-)
G141515 NA non-coding downstream 82148 4364046 ~ 4381587 (-)
G141513 NA non-coding downstream 100500 4362849 ~ 4363235 (-)
G141475 NA non-coding downstream 173254 4290274 ~ 4290481 (-)
G141471 NA non-coding downstream 181600 4281909 ~ 4282135 (-)
G141539 NA non-coding upstream 44002 4510259 ~ 4510623 (-)
G141572 NA non-coding upstream 150749 4617006 ~ 4619841 (-)
G141490 NA non-coding upstream 164079 4630336 ~ 4637669 (-)
G141679 NA non-coding upstream 242531 4708788 ~ 4708995 (-)
G141481 NA other downstream 50925 4372247 ~ 4412810 (-)
CI01000027_03922380_03931033 NA other downstream 538163 3922242 ~ 3931033 (-)
CI01000027_03787377_03788902 NA other downstream 674513 3787377 ~ 3790279 (-)
G140118 NA other downstream 879056 3509352 ~ 3584679 (-)
CI01000027_02226447_02227499 NA other downstream 2235710 2225781 ~ 2227499 (-)
G141488 NA other upstream 41218 4507475 ~ 4508971 (-)
G141728 NA other upstream 410810 4877067 ~ 4877766 (-)
G141588 NA other upstream 642078 5108335 ~ 5201155 (-)
CI01000027_05447458_05450346 PON2, PON3.2, PON3.1 other upstream 983069 5447424 ~ 5450461 (-)
G141638 NA other upstream 2322370 6788627 ~ 6796707 (-)

Expression


Co-expression Network