CI01000027_04603997_04606475


Basic Information

Item Value
gene id CI01000027_04603997_04606475
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4603444 ~ 4608289 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_04603997_04606475.mRNA
AGGCTCCAGATTTTCATATAATCACTGTAAAATGTGTGAAGGGTGATTGAGATTTAGATAGGAGTACCTGTAAATAAGAAGCTCTCAGGCAGGTGGGCTGCTGCAGGTCCATGTGTTTAATTTGATTTTGATTTAGGCCAAATTTGTATTCTGCCCCAAGCTACTTATTAGTGTGAACAGTACCTGTAAACTAGGTCAATTCCTGCATTGTTTCATAGGTTTTAAAAACGGTAGTGCCAGATGACAAACTAACACAGCAACACTCCCATCCATATCCGCACCATTGCTCTAATTTACCGTTCAGTCAGAGCGTGACCTAAACACCTCAGCCATTCTAATATAAAGTCAAATAATGAAGTGTGAGAGAAAGAGAGACTGAGAGAGAGTGTGTGTGTGACAGTGAGAGATGCTGAGATTGAATGGTGTCACAATGCAGGCATATTGAGGTCATTTTGAAAAAGTGCTGCTAATTACAGCAGATGGAATGAAAAGAAACAGGGGACTGTACACTGGGCTCCATGTATGATGCTGAAAGAGGGAGGAGAGCGAAAAAGCAGAGGTGGGAGACAGACGGAGACTCCCTGAGAGAAACATACAGGAGTGAGAGAGAATGGAGAAGTGATGGAAAGAAACACACAAGGAGGAGAGAGAGAAAGAGGTTCCGTGAGGACAAAAGCGCAAACCTAACATATTTCTAGCAGATATGTAACTATACTAGACTCATATTTGGGGCAGAAGTCACTCCTATACATCTAGAGTTTCAAGCGATCATTTCCATGTTTTCTGGATGACTTTGACACTACAACTGAGGCTTGAGGCATAAAACTGTAAAGCTGCTTTGTGTCAATTACTTTAGTTAAAAGCAAATGAAACAAAGACCTCAGATGAGCTACAATTTGAACCAATTTGAGGGGCTACAAAGCATTACTATTCAACAAACATCTGCCTAACCTGCATGTGGTTATTTTCAAGATCAAGAAGTTTAGAAAATCTATCACTTTAATCTATCACTTTAAAATAAAAAAATGCATTGATTATTGATTATGGTCATACAGAGAGACACACAAACACTCACAAACATGACACATCCCAAAAAGCTCCTTTCCTGGTCTACTGACGCACCTGCCCCATGAGGGAATCCCAGTAAATCTAGGTAAACCTCTAAACTGGTTTCAAAATAGGTAATTACGACATTTGGTTTATTTTGTAGCTACAATTCCGGCTGAAAAGATTTTAAAGCGGGGTTTAGCTATTTTTAAGCATTTTTTGAAATCTGTTAAAATATATTTTCTAATAAATTAGGCCTTATTAGTGTAAAAATGACGATAAAAGCTACTTACAATATGTTTGAACTGTTCCAGTGTACAGCGTGTCTGGCTGCAGTCACCAGGTCAAAGTTCGTGCAGAGTGCAGTGCTTTATATCCTATTATCCGCAAACCTCCATCCTTCTATCCACACCTGCTCTCTCTCTCCAGACAGTGAGGGTTTTTTGTCCAAGAATGAGAAAAAGCGAAGTTTCTATAGCAGCGATGAAATATTTCACTCCTCTTTTCAACAGTCGTTCCTTTGCCCTGTCAGCACACAAGTTTTGGAACTCAAGCAAAAAAATGTAAATTGGTACGGAGCAGATGATGAAAAATGGTAGTGTATCATTTTCAGGCCCCGTGACACCGTGGCCCTTATGACATTTAGCTCGGGGAGTTCCTGCTCGGCTCTATCTGTCACATGGCCGGTTCTCGTTCTCAAATCCAATCTCCACATACTCATAGCCTTCAATCTAATAGAACATTCAGCTCCTGCCCAACTTTGATTTGCTTTCAGATATAAACTATCCAACTAAAACACAAACACATCGGACTGTACGGCTGACCTTATGACACGGGAAGTTCTCTCCCTGTGACCGGGAGGTGACGCGGCGTCACCGTCACACTGAAGACATTGGGGCAGAATGGAATGAGCTCTGTAGACTGTTGAATAAGAATGCAGATTTATATTTGCCTGTGTTTGCCCACATTCCCAAATCTCATTTAAAAGATCACACCATGGGAATCTAGCACATGTAAAATGGCCATTTTAAAACATTCAACATGAAATACAACTGTGGTCAGTTGCAACAGAAAATAAGCTTGAAGAAAAAAAAAAAAAAAACACAATTAGCAATATGATATTAAAAGCAAGTGTGCAGCACTGTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_04603997_04606475.mRNA False 2199 mRNA 0.40 5 4603444 4607794

Neighbor

gene id symbol gene type direction distance location
CI01000027_04524446_04527464 NA coding downstream 75980 4523811 ~ 4527464 (-)
CI01000027_04464282_04466128 NA coding downstream 137187 4463735 ~ 4466257 (-)
CI01000027_04439446_04461699 SHC1 coding downstream 141240 4437640 ~ 4462204 (-)
CI01000027_04424958_04434987 NA coding downstream 168215 4424309 ~ 4435229 (-)
CI01000027_04419264_04422151 NA coding downstream 181064 4418107 ~ 4422380 (-)
CI01000027_04744526_04745444 NA coding upstream 136564 4744358 ~ 4746698 (-)
CI01000027_04750483_04762663 TRIM46, TRIM46A coding upstream 142526 4750320 ~ 4762663 (-)
CI01000027_04812648_04813272 NA coding upstream 204828 4812622 ~ 4813877 (-)
CI01000027_04988247_04994680 RPS27.1, RPS27, RPS27.2, RPS27.L, RPS27L coding upstream 380440 4988234 ~ 4994680 (-)
CI01000027_05037013_05040668 OSGIN2 coding upstream 427393 5035187 ~ 5040668 (-)
G141539 NA non-coding downstream 92821 4510259 ~ 4510623 (-)
G141519 NA non-coding downstream 207040 4393403 ~ 4396404 (-)
G141515 NA non-coding downstream 221857 4364046 ~ 4381587 (-)
G141513 NA non-coding downstream 240209 4362849 ~ 4363235 (-)
G141475 NA non-coding downstream 312963 4290274 ~ 4290481 (-)
G141572 NA non-coding upstream 9212 4617006 ~ 4619841 (-)
G141490 NA non-coding upstream 22542 4630336 ~ 4637669 (-)
G141679 NA non-coding upstream 100994 4708788 ~ 4708995 (-)
G141601 NA non-coding upstream 166407 4774201 ~ 4777980 (-)
G141695 NA non-coding upstream 178060 4785854 ~ 4795739 (-)
G141488 NA other downstream 94473 4507475 ~ 4508971 (-)
G141481 NA other downstream 190634 4372247 ~ 4412810 (-)
CI01000027_03922380_03931033 NA other downstream 677872 3922242 ~ 3931033 (-)
CI01000027_03787377_03788902 NA other downstream 814222 3787377 ~ 3790279 (-)
G140118 NA other downstream 1018765 3509352 ~ 3584679 (-)
G141728 NA other upstream 269273 4877067 ~ 4877766 (-)
G141588 NA other upstream 500541 5108335 ~ 5201155 (-)
CI01000027_05447458_05450346 PON2, PON3.2, PON3.1 other upstream 841532 5447424 ~ 5450461 (-)
G141638 NA other upstream 2180833 6788627 ~ 6796707 (-)
G142203 NA other upstream 2533300 7141094 ~ 7143063 (-)

Expression


Co-expression Network