G141539


Basic Information

Item Value
gene id G141539
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4510259 ~ 4510623 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160834
GAGAGTGACACTCAGACACAAACTCCCTCCCTCCTTTCCACTTTCGTCTCTTTCCTTTTGCCGTCTGACCTTCTTTCAGGCTCTCGCCTTCCCTGTGCGTTCTCCCTCTGCTTTTCTCACACTTCCTCCTCTCGTCTTTTCTCTCCTCTGTCTTCTCCTGTGTTTCGCTCCATCACTCTATCTTTGTTGCTTTTGTGGCCCTTCTCTGTTCAGTCTTGTATCTCTTGCTCCTTTTCCCCCTCTAAATCTTTCCTTTTTCCACGGTTCTTTCTCTTGTTCATCCTCTCAGTCCACTTTTTTGTTTCTTGCAGAATCTTTCATCTCCTTCCACCTTCATTTTTTTCGCTATCTTTCTGTGTGCGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160834 True 365 lncRNA 0.46 1 4510259 4510623

Neighbor

gene id symbol gene type direction distance location
CI01000027_04464282_04466128 NA coding downstream 44002 4463735 ~ 4466257 (-)
CI01000027_04439446_04461699 SHC1 coding downstream 48055 4437640 ~ 4462204 (-)
CI01000027_04424958_04434987 NA coding downstream 75030 4424309 ~ 4435229 (-)
CI01000027_04419264_04422151 NA coding downstream 87879 4418107 ~ 4422380 (-)
CI01000027_04401843_04403095 S100A11, S100T, S100S coding downstream 107164 4401490 ~ 4403095 (-)
CI01000027_04524446_04527464 NA coding upstream 13188 4523811 ~ 4527464 (-)
CI01000027_04603997_04606475 NA coding upstream 92821 4603444 ~ 4608289 (-)
CI01000027_04744526_04745444 NA coding upstream 233735 4744358 ~ 4746698 (-)
CI01000027_04750483_04762663 TRIM46, TRIM46A coding upstream 239697 4750320 ~ 4762663 (-)
CI01000027_04812648_04813272 NA coding upstream 301999 4812622 ~ 4813877 (-)
G141519 NA non-coding downstream 113855 4393403 ~ 4396404 (-)
G141515 NA non-coding downstream 128672 4364046 ~ 4381587 (-)
G141513 NA non-coding downstream 147024 4362849 ~ 4363235 (-)
G141475 NA non-coding downstream 219778 4290274 ~ 4290481 (-)
G141471 NA non-coding downstream 228124 4281909 ~ 4282135 (-)
G141572 NA non-coding upstream 106383 4617006 ~ 4619841 (-)
G141490 NA non-coding upstream 119713 4630336 ~ 4637669 (-)
G141679 NA non-coding upstream 198165 4708788 ~ 4708995 (-)
G141601 NA non-coding upstream 263578 4774201 ~ 4777980 (-)
G141488 NA other downstream 1288 4507475 ~ 4508971 (-)
G141481 NA other downstream 97449 4372247 ~ 4412810 (-)
CI01000027_03922380_03931033 NA other downstream 584687 3922242 ~ 3931033 (-)
CI01000027_03787377_03788902 NA other downstream 721037 3787377 ~ 3790279 (-)
G140118 NA other downstream 925580 3509352 ~ 3584679 (-)
G141728 NA other upstream 366444 4877067 ~ 4877766 (-)
G141588 NA other upstream 597712 5108335 ~ 5201155 (-)
CI01000027_05447458_05450346 PON2, PON3.2, PON3.1 other upstream 938703 5447424 ~ 5450461 (-)
G141638 NA other upstream 2278004 6788627 ~ 6796707 (-)
G142203 NA other upstream 2630471 7141094 ~ 7143063 (-)

Expression


Co-expression Network