CI01000029_03799874_03822017


Basic Information

Item Value
gene id CI01000029_03799874_03822017
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 3799855 ~ 3822181 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_03799874_03822017.mRNA
ATGCCCCAATGAATTGGAAGCAAAACTGAAATTAAATTGAATATGAATCATTGAATCAAATTGACAATCTCTGAATCAGAACTGAATAGTAGTGCAGACATCCTTAAATTCATCTTTTTTAGACAAAATGAAATTTCACTACAACAGTCAAACAGAGGCCAAAAATGATCAACAAAACTTTTTGTTGTGGTCACGGCTGGTTAGGACACTGCGTTAAGCATGGATTTTTGTGGCCTAATAAAGCAGAGATAAATCTGTCAGACCCCAAGACTTTTCCAACCACGCCTCTCAACAGAGCTGGATTTACAGGTCTCCAGAATCAAAACATCAAACTCCTCAGAACCAGAAACAACATCTCCTTGCACATGACGACAATGTCTAGTCCTACTTCACGCGGCTCATCCGGGGCGGACCTGCTTAACAAACCTAAACAGCTGTCTGCATTGGTGGAGTTACCAGATATGAAACAGAGCGGAGGTCATCTCCCATACATGCATTGTCTACTTGTTACAATATTATTGCTCTCGGTAGGTAATGCCCCCCCGGCTCGGGGCCCTAGCGGGGTGGAGAGCTACAACGGAAAGGCCCGGACGACTGCCAAACAAAGCACTTGCTCCGCTCAGCAACGCAATGGGCATCCAACACTTGCCAAAGCGGATGTCACAGAGCCAGTCTTAGCCAGTATGAGACACATGGGAATGGAATCACAAGGATTCAGTAGGATAATATATGACATATCAAGCGCACGTTTCTTCACTATAACAATCTCGCGTGCTGGGGGAATGAATCTCGCGGCACGGACAGCCAGAAGCTCGTGCGGCCTGTGCTCGCTCGCGGCTCCGCGGACTCACCTCAGTCGGTTGGCTGATCTCGAACAGGTCGAGCCGGTTGGCGTTCCAGTGGTTGATGATGTCGGCGAGTTTTCGCCGCTCCTCCTCTCGGCTCCCCATTCTCAAATCCCGACTAATTCTAGTCAGAGAGAGAAACAATCTGCCTATTTCCTCGCTGGTTCTGTTTTATCCAGTCAAACGGGCTTCTAATCCGACGACCTGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_03799874_03822017.mRNA True 1059 mRNA 0.47 6 3799855 3822181

Neighbor

gene id symbol gene type direction distance location
CI01000029_03769171_03775841 UNC93A coding downstream 24014 3768787 ~ 3775841 (-)
CI01000029_03746973_03752660 PLG coding downstream 47195 3746936 ~ 3752660 (-)
CI01000029_03723621_03726874 NA coding downstream 72785 3723187 ~ 3727070 (-)
CI01000029_03698769_03707177 NA coding downstream 91972 3698572 ~ 3707883 (-)
CI01000029_03625037_03636215 RFX6 coding downstream 162822 3624704 ~ 3637033 (-)
CI01000029_03925339_03926640 NA coding upstream 102984 3925165 ~ 3926668 (-)
CI01000029_03927561_03936968 NA coding upstream 105318 3927499 ~ 3936968 (-)
CI01000029_03942459_03946094 NA coding upstream 120255 3942436 ~ 3946094 (-)
CI01000029_03949550_03958610 NA coding upstream 127125 3949306 ~ 3958744 (-)
CI01000029_03988871_03998768 NA coding upstream 166409 3988590 ~ 3998768 (-)
G154057 NA non-coding downstream 59136 3736231 ~ 3740719 (-)
G154047 NA non-coding downstream 111385 3688227 ~ 3688470 (-)
G154046 NA non-coding downstream 111727 3687852 ~ 3688128 (-)
G154040 NA non-coding downstream 165312 3633985 ~ 3634543 (-)
G154017 NA non-coding downstream 225399 3574064 ~ 3574456 (-)
G154137 NA non-coding upstream 179995 4002176 ~ 4002475 (-)
G154140 NA non-coding upstream 234556 4056737 ~ 4057258 (-)
G154144 NA non-coding upstream 240001 4062182 ~ 4062422 (-)
G154146 NA non-coding upstream 242391 4064572 ~ 4064850 (-)
G154147 NA non-coding upstream 246407 4068588 ~ 4068822 (-)
G153891 NA other downstream 513301 3248777 ~ 3286554 (-)
CI01000029_02589994_02592379 NA other downstream 1207053 2587549 ~ 2592379 (-)
CI01000029_01293143_01293964 BATF3 other downstream 2505732 1292249 ~ 1294123 (-)
CI01000029_04460778_04463540 FKBP1B other upstream 638162 4460159 ~ 4463540 (-)
G154415 NA other upstream 1163927 4986108 ~ 4990990 (-)
G156542 NA other upstream 3348186 7170367 ~ 7170951 (-)
G156495 NA other upstream 3544146 7365007 ~ 7371921 (-)

Expression


Co-expression Network