CI01000030_05561747_05564633


Basic Information

Item Value
gene id CI01000030_05561747_05564633
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 5561747 ~ 5564710 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_05561747_05564633.mRNA
ATTAACTTTTTGATCCCCCATCATACAACAGAGACCAAAAACCAGAAAACAAAGCTACAGTCATTTGTGAGATGAAAATGAGAGTTCCTGTACAAATCATCTGCTTTTCCTGTTTCCTATTTTCTGTTACCTTTGTGCAAGGTCAAGAGAAAAAGTGTGGTCACCCAGAGGAAACCAAAATGGTTATTTTAAACTTAGAGAGGGGAGAAATTATACTTACAGAGCAACAGTGGAGTATACTTGCAAGACAGGTAACTTGCCAGCTTGAGTTGACCGAATCTGAAGCAGTAAGAACCATACCAGAGGGAAAAACAATTTTCAAAGCTGGAGAAACGGTGGAAATTACCTGCTCTGGCAAAAGCCAGATCTTTTACAAGCAGGAAACATTTACATGCACAGATAATGGGAAGTGGGATTACAAGCCAACTTGTGAGGAGATTAAATGTCAAGTTCCACACAACCAGCATGTATATCTACCCACATATTACTTCAGTGGAAATCTGAATTTGAATGTAAAAAGATCTTACAATTGTGAATCTGGATATCGTAAAATGGCAGTCCAGGCCACATGCAAACGAGACGGGTGGACACCAAAACCACTGTGTGCTGAAATTATGTGTGACCCACCAAACATCCCAAATGCAGAGATTGTGGGAGATGGTACTTGTCAGGAGCAAGAACTCAAAAATGTAGAAATTCTATTTGGACATCCAGGCATCACTTCACCTTATAAACCTGGGCATATCTTAGTTTTTCGATGCACTAATGTCAACATGAGGTTTTACGGCCAACGGGCAATTGAATGCCAACCAGATGGGAGGTGGAATTACCCATATCCACAATGTGGAGGAACAGTTCAGTGTTCCCAACCAACAACGAACTTGCGATTTGTGACACTGTCAGATGAGAAAACTGTGTTCAGCAACTTTGAGATACTGACATACGAGTGCAATGAACCATACAATGAAAATTCAGGAGGAGTTTTGATGTGTCAAAATGGAAAATGGAACGGAACGTTTATCTGCAAAA

Function

NR:

description
complement regulatory plasma protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_05561747_05564633.mRNA True 1029 mRNA 0.40 7 5561747 5564710

Neighbor

gene id symbol gene type direction distance location
CI01000030_05519604_05542781 NA coding downstream 18940 5519546 ~ 5542807 (-)
CI01000030_05477128_05482150 NA coding downstream 79597 5477128 ~ 5482150 (-)
CI01000030_05357534_05377672 CRB1 coding downstream 184075 5357466 ~ 5377672 (-)
CI01000030_05261553_05285669 NA coding downstream 275636 5261296 ~ 5286111 (-)
CI01000030_05233712_05242487 LHX9 coding downstream 319260 5233466 ~ 5242487 (-)
CI01000030_05784109_05788689 NA coding upstream 219106 5783816 ~ 5788689 (-)
CI01000030_05791222_05793350 NA coding upstream 226343 5791053 ~ 5793350 (-)
CI01000030_05801355_05807277 NA coding upstream 236611 5801321 ~ 5807277 (-)
CI01000030_05996557_05996952 NA coding upstream 431316 5996026 ~ 5997542 (-)
CI01000030_06042392_06063112 VTG1, VTG7, VTG6, VTG4 coding upstream 477544 6042254 ~ 6063126 (-)
G160732 NA non-coding downstream 5284 5555952 ~ 5556463 (-)
G160784 NA non-coding downstream 8463 5553045 ~ 5553284 (-)
G160710 NA non-coding downstream 41794 5416321 ~ 5519953 (-)
G160711 NA non-coding downstream 84097 5450566 ~ 5477650 (-)
G160735 NA non-coding downstream 84855 5473564 ~ 5476892 (-)
G160789 NA non-coding upstream 33697 5598407 ~ 5598608 (-)
G160806 NA non-coding upstream 84709 5649419 ~ 5649871 (-)
G160824 NA non-coding upstream 96713 5661423 ~ 5662944 (-)
G160833 NA non-coding upstream 112372 5677082 ~ 5677284 (-)
G160940 NA non-coding upstream 117164 5681874 ~ 5682395 (-)
G160712 NA other downstream 49673 5456960 ~ 5512074 (-)
G160713 NA other downstream 138234 5419119 ~ 5423513 (-)
CI01000030_03491770_03493119 CELF5A other downstream 2068647 3490119 ~ 3493741 (-)
G160213 NA other downstream 2092585 3466353 ~ 3469162 (-)
G158980 NA other downstream 3029183 2499584 ~ 2536375 (-)
G160949 NA other upstream 232587 5797297 ~ 5800426 (-)
CI01000030_06131710_06138371 NA other upstream 568665 6131090 ~ 6138406 (-)
CI01000030_06701334_06704398 MGC53794, FAM195A, FAM195A.S, MCRIP2 other upstream 1136345 6701055 ~ 6704745 (-)
CI01000030_06747047_06752255 NA other upstream 1178548 6746960 ~ 6752411 (-)
G163065 NA other upstream 1359773 6924483 ~ 6925657 (-)

Expression


Co-expression Network