CI01000030_08232550_08241049


Basic Information

Item Value
gene id CI01000030_08232550_08241049
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8232101 ~ 8241049 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_08232550_08241049.mRNA
ATGGGTGATGATACACTTGGTCCTGTCTGTACTCTGAATATTGTTGGGATGGCTGTATCCTTTAGACGCTGTACCGTGGTACGGAAAAATGCTCAGTCATCATTCACTAAGCTTTACTGTTACATTTGTACAGAACAGGACCTTCAGCTCAATATTGACGCAAGTAATGGTAGCACAGTGTTTGCTCCATGCATAGTGGGATCTAAAATAGCTGGTGATGTTACCATGAACCTACAAATGGTGTCTCACTCTACCTCAATAAACAAAAATGACATTCTTCAGATCATAAAGAATAAGATGAAATCAAGAATGATGAAGGATTCGGAGAGGATTTTGGAGGGAAGCGCACAACAGTCTGTCACGCTAAATAAGATCTACACACAACTGTTTATCATCAATGACGACTCGGACCCCATCAATAAAGAACATGAGATCTGGCAGATTCAGACGAATGATATAAACACATCAGCGCAGACAGTTATAAACTACAATGAAATTCTTAAACCACCAGTGGATGAAAATCGAACCATGAAGATTGCTTTAACAAAAGGAATTGCTGGAATTGGAAAAACGGTCACGGTGCAGAAGTTTGTCCATGACTGGGCAAGCGGAGAAGCCAATCAGGATCTAGAGCTTGTTTTTCTGCTCCCGTTCCGAGAGCTGAACCTGCATGAGGGAGACAACCAGAGTCTTTTTGACCTGCTTTGTGTCTTTTACCCAGAGTTACCCAAAGAGGCGAGGCACATCTCTGACTGGATCTTTGATAGAAAAGTTCTGTTCATCTTAGATGGTCTGGATGAATATAAAAATGATTTGAAATTTGAAGCCAAAGACATTTTGTCAGATGTTACTAAAAAAAACACACTGGATGTCCTTCTAGTAAACCTTCTACGAGGAAAACTGCTTCCATCCGCACACCTGTGGATCACCAGCCGGCCTGTGGCTGCTGGACAGCTTCCATCTGAGATCTTCAGACAGGGATACGTCACACAGATCAGAGGATTCACAGATGAACAAAAGGAGGAGTACTTCACGAGGCAGTTTGAGGATCCAGATCTAACCCAAAAAGTTATCCGTCACCTGAAGTCTCATAAGAGCCTGTGGATATTGTGCCACATACCTCTCTTTTGTTGGATTTCATCGGTTGTTCTCAAAAACATAATTAAAAGTCAAAATAAAGATAGGGACATGCCCTCAAATCAGACAGAAATGTATATCCACTATCTGCTCAATCAGACTACGTTAAGCCACAACAAATATCAACGGAAAGAACTTCCACATGAAGATGCTCTCATACAGCACAAGGAACTGATTAAGAAACTGGCAAAGCTGGCTTACTGGAAGCTGAAGGAACGGAATACAGTCTTCAGTAAAGAAGACTTGAGGAAATATTATATCACTCCTGATGATGCTCTTCGATATCCTGGCATCATCACCTGTGTCTCTGAGTGCAAAGTTGGATATAACAGGACTAAACTTTACAGCTTTGTCCATCTCAGTGTTCAGGAATTCTTTGCAGCCTTGTTTGTTTTTCATGAATTTCTATCAGGAAATCAAGACTCCCTGGAATTAATAAAAACTAAAAAGGGGCAAAAGTCTAATTTGTCTGATTTTCTCAAAGGTGTGATTGATGTGGCCGTGCAAAGCAAAAATGAACACTTGGATCTTTTTAACTGTTTTCTCTTCGGAATTTCTTGTGATTCCAGCAGACAAACACTTGAAGGATTCCTGCCTCCATTGCAAGACAGTAGTTCAGAGAACCACAAAAAAGTAACAAAGTACATTAGGTCTTTGAGGAGGAAAGATCTGTCCCCTGAGAGATGCTTCAGTCTTGTTCGTTGCCTCGTGGAGCTCAAAGACATGCAGATGCAAAATCTCGAATGTTCACAGATCAAAAAGCCCCTCACACTGTTTGAGTGCACATTTCTGGCTTTCCGGTTTGTGATGTCAGATACAGACCATGAAGAGTTTGTCCTCAGGAAATACAACATGACTTTAGAAGGATTTCAGAGATTCTCTCCAGCCATCAAGTGCTTCAGAAAGGCTCAACTCAAAGGAAGCGGCTTTACAGAGAAACACTGTGATGTCCTGGTGTCTTTCCTGACCTCGCCAAACTCTCACCTGACTCATCTTGATCTGAGCCACAATAGTCTGGGACCATCTGCACTGGAGCAAATTTCTAGGGCCCTCTGTGATCCCAACTGCCAGATTCAGAAGCTGAACCTCAGCCACAATGACCTCAAAAGTCAGGACATGGAGCTGATCAAGAATGTGCTTTCAGGATCAAATGTGAATCTAAAAATCCTGGACCTCAGCGACAATCGTGTAGAAGATCTAGGAGTTGAAATTCTTTCAGCTGGGCTGCGGAGAGCCAAGTGTCATCTTGAGGTTCTGAAACTATCAGGCTGTCAAATTAAACAAGGAGTTTCTAAGTTGCTGTCATCTTTGAAAGCCAATTCCTCTTTGAGAGAGCTGGACCTGCAGTATAATGACCTTGGAAACATGGAACAGAAAGTTCGTCTTCTGAAGGCTAAGCTGCCCTCACTGAGGTACTGTAGCTTCTATCTTGTATCAGTTCATGTAGAAGGGGCCTCATACCTCACATGGAAGTTGTTCCGGTACATAAAGAAAACCAGATGTTATAGTATAGAATACAGCTTCAACAGAGGACAAAGGACCCTCTGTCCACCTTCCTTCAATGCTGAGAACAATACTTTAAACATAAAATCTTTCAATGCTATCGCGCTCACATTTGACCCTCAGACGGCTAATGAATACCTCTATCTGAGTGAGAACAACACAGTAGCTGTTCGTAAGGGGGAGAAACAACAGCTTCCTGCTAATGATGAAAGATTTGACAAGTGCAACCAGGTCCTGTGCTGCCAGCCGCTGTCAGGACGCTGCTTCTTTACGGTGGACGTGATTGGGACAGGTGTGTACATGGGCGTGGCCTGTAAGGAAATCAAGAGGAAGGGTAAAAGTGACGCAGTACATCTGGGACGCAACAAGATGTCGTGGAGTTTATGTTGCTCAAAAAATGTATGTGTAGCTCATAACAAAAAAACTGAATCATTAACTAAACCACTTCAAACAGAGTCCACTAGAAAGCTCGGTGTGTTCGTGGACCAGAAGGCTCGTTCTGTTCTCTTCTATAGGTTGAGCCCAGAGCCTGAACTCTTGTACATGTTTGATGCAGATTTTCCTGAGGACCAGAAACTTTATGCTGCGTTCAGTATTCAGAAACCAGACAGCTCAGTCTGTTTAAGGCAAGCATCACTATAATTATACGTACAGAATGTCAGTTATTGTTTGTGCTTCAGAAATGAACAATGCCTCACATGTTTAAGTTATATTTAACAACTTTTTTCAGTTAAAATGTCTTTAGTTGTGTATATCTCAGAGTGGCTGGTTTTTATTGGATTTACTGGATTTATTGGATCTAATGCACTTTCTATGTATTGGACTGATTATTTAAATCTGTTTTAATATACTGTTATCAGTCTACCCTCACTTAAAGGGATATTTCACCCAAAAATGAAACTTCGGCCATCATTCGTTCACCCTTATGTCGTTCCAAACCTGTGTAAGGCTGGTTTTCCTGCTAAAGCCCAAAATTTACTTTGACAATCTGCTTTTCGCAATGGTCCGCACACTGTCTGTGTGACGTATTTTCGAGGAGGGTCTGCGGAAATTGGAATCAGTTTAAATACTAAGCTGGTGTCAAAATTAAA

Function

NR:

description
hypothetical protein cypCar_00037787, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_08232550_08241049.mRNA True 3731 mRNA 0.42 8 8232101 8241049

Neighbor

gene id symbol gene type direction distance location
CI01000030_08201019_08203601 NA coding downstream 28456 8200166 ~ 8203645 (-)
CI01000030_08185866_08194632 NA coding downstream 34835 8184897 ~ 8197266 (-)
CI01000030_08175807_08180515 NA coding downstream 51208 8174922 ~ 8180893 (-)
CI01000030_08144020_08149228 TBC1D20 coding downstream 82873 8143888 ~ 8149228 (-)
CI01000030_08128628_08130625 RPP14 coding downstream 101476 8128462 ~ 8130625 (-)
CI01000030_08328834_08331465 NA coding upstream 87053 8328102 ~ 8331540 (-)
CI01000030_08335819_08343892 NA coding upstream 94514 8335563 ~ 8345898 (-)
CI01000030_08350086_08366927 NA coding upstream 108649 8349698 ~ 8367079 (-)
CI01000030_08367669_08379327 NA coding upstream 126303 8367352 ~ 8380882 (-)
CI01000030_08393024_08396689 NA coding upstream 150940 8391989 ~ 8396748 (-)
G163500 NA non-coding downstream 22123 8209741 ~ 8209978 (-)
G163496 NA non-coding downstream 62521 8169356 ~ 8169580 (-)
G163495 NA non-coding downstream 63275 8168518 ~ 8168826 (-)
G163398 NA non-coding downstream 65008 8165097 ~ 8167093 (-)
G163493 NA non-coding downstream 75495 8156371 ~ 8156606 (-)
G163507 NA non-coding upstream 5389 8246438 ~ 8246812 (-)
G163511 NA non-coding upstream 18004 8259053 ~ 8259386 (-)
G163513 NA non-coding upstream 26325 8267374 ~ 8267642 (-)
G163514 NA non-coding upstream 27861 8268910 ~ 8269191 (-)
G163518 NA non-coding upstream 37758 8278807 ~ 8279015 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 439719 7788797 ~ 7792198 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other downstream 494097 7735436 ~ 7737720 (-)
G163139 NA other downstream 1081957 7149474 ~ 7150144 (-)
G163065 NA other downstream 1306444 6924483 ~ 6925657 (-)
G163873 NA other upstream 692364 8933413 ~ 8933982 (-)
CI01000030_09277337_09294501 NA other upstream 1046157 9276431 ~ 9294802 (-)
G164071 NA other upstream 1234139 9475188 ~ 9476264 (-)
CI01000030_10103451_10131419 NA other upstream 1874466 10102944 ~ 10133765 (-)

Expression


Co-expression Network