CI01000030_08367669_08379327


Basic Information

Item Value
gene id CI01000030_08367669_08379327
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8367352 ~ 8380882 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_08367669_08379327.mRNA
AGAGCCAGTAGATAAAAGACATCTATGTTAGTATCATCAGGAACCATTTGATACTGCTGCAGATCTGTCAAGCTGTATTCCACTGATGTGAGTATGATATTGTTTCACTTGACACAACAGGAATTTCTATGAATAGATTTGACATATGTGTAAATATTATTTTAGCCAGGGTTAATAAGTAAATTCTAGGATAAAGACTTAAAAATACCAGAGGTGGAAAGTCCAGGGGTCAGAAAGTAAAAGTCCTGCCATATTTTTATTCCACCCACTGAAGCAGTGTTAAAGTTAATGAGATAAATAAGTGTTTAATTGAGGTGATGATTGACCATTATTGATATTAACAAGCAGAATCGNNTGAAGATACCTGATGTTAACAAGCAGAATCGCCAAAGGAGAAAAATCACAATTTTTAAGAAACCATCACAGAGGTCAGGGTTTGCTTTAGTTGGGCTCTTGACCCTTGACTTTTTAATGTTAGATTTTGTTTGGGCTGTTGTATCTGTTTTATAGCAACCAGACAAGCAAAGTTAAAAGATGATCAGGTGGTGTTGGTTATGTTTTCACATCATCACTATTTGATCTGAATCACTGAACTCAGCCCAATCTCTGAGTTAGATTTACATTATTGATTTATTCCTTATTTTATTCATTATCTTTGCTTGTCTGGTTGTTATAACTCAGTTACAACAGTACAAACAAAACCTAACATTAAAAAGTCAAGGGTCAAGAGCCCAACTAAAGCAAACCCTGACCTCTGTGATGGTTTCTTAAAAATTGTGATTTTTCTCCTTTGGTGATTCTGCTTGGTAACATCAGGTATCTTCACCTCAATTAAACACTTATTTATCTCATTAACTTTAACACTGCTTCAGTGGGTGGAATAAAAATATGGCAGGACTTTTACTTTCTGACCCCTGGACTTTCCACCTCTGAAAAATACTAGACCCTAAGAGGCACTCTACATCTAAAAGACTTGTTTTTCAACATCAACTTGAAATATATGTTTATATAATGTGTATATATATCTCATGTTTCTTCTCATGTCAATTACCATAATGATGACAGGAAATCCACCTTTAAGACAATACAAACAACATTAGCAAAATACCTTGAAATCTGTCTTTACATGTGAGAGAAAGTTCTGATTTGAGTAAAGCAGAGCTGAATTTAATATAGCAAACTTTTGGGCAAAAAAAAAAAAAAAGAACAAATTTAATATACTGAACTAAACAAATGTACTGCAGTTGTGGACTAACTACACAAATCATGTACTTGAGTAAAACTACAGATACCCAAATAAAATATTACTCCAGTAAAAGTATTTGAAACAGTGAGTTGCTGACTTGAGAACAGATGTAGTGAAGTAAAAGAGATTTTTCATTATACTATCAAACCTGAAAAGAGTGGCCGAAGGAGCCGAAGAGGAGGAAGTACTCTAGTAAAGCATAATCACAGACTGATAACTCTAGTTTACAATCTGCAAACAACATAGCCTAGTTTGTCTTGTCATATCTCTTCACCACAGACCAGGAAAAAAAAGAAAGAAAAAAAAAACATGGACACAAAATGTTCAAAGCTGGGTTTCACCTTGTACATCTTCCTCACTTTGGGTGGGTGCGCAACTGTAGGATATGGTATATGGTTACAAATGAAGAGCAACACACCTGACTTGTTAAAAACAGTTGATGATGCAACACTTACAACGCTCCTGTCCCTGGGGGACCCGATGCTGATCACTCTGGGCTGCATCCTCGCTGTGATGGGCGGGATTGGCAGTTTAGGCATTTTGAAGAATAAACGCTGGATGCTCTTGGTTAAAGAAAAACCCTTCAGGAGCTTAGAGAGCAAACTGTTACAAACCATTGAGAAGAACTATAAAGTTGACTCTTCAATCACTAGCATATGGGATGAAACCATGAACAAGCTGCATTGCTGTGGATACAAAGGCTATGATGACTTCACACATTCCGCTTGGGTACAGTCGAACTCGTATCCCGAACAATGCTGCGGTGAATATACAAATACAAATTCTGTTTGTAGTAAAAAACAAGCTGAGAAAAAGGAAGTAAACGGCTGCATTCATGTCCTGTTGAGCGAAAAAAGTTTTCCCATTTCTGGAGCTTTGTTCTTTTTGATCGGGATTCTAGAGATTGTTGCCTTGGTCGGTTCCCTGACAGTCTACCGATGCTTGAGACGCATACCTAATCTCCCCAACCCCTTTGAAAATAATCTGTGATAAACAACTTTTTATAAATGTGTGCAAGTTATTTGTGTTTTATTATTAATTTTGCATTTATTTACAGTGCCTTCAGAGTAAAAAAAATCACATTTTGATTATGAAAGATGATGTGTGAAAAAAATATTTTTCTTAAAAATATTACTTGATTTCAGTTTTATAATGTCTATCAAATATAACAAAGTGCATAGTGGCTTCTCATTTTATTTACTGTTTCTTCTTTTTTTTTGTAAAGACAAATCACTTACAATATGATTCTATTATTATAAAGAACAGCTGTTAACCTTTAATAATTTCCTTTAACAATGATTAATAAA

Function

NR:

description
Zgc:64085

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_08367669_08379327.mRNA True 2553 mRNA 0.35 6 8367352 8380882

Neighbor

gene id symbol gene type direction distance location
CI01000030_08350086_08366927 NA coding downstream 273 8349698 ~ 8367079 (-)
CI01000030_08335819_08343892 NA coding downstream 21454 8335563 ~ 8345898 (-)
CI01000030_08328834_08331465 NA coding downstream 35812 8328102 ~ 8331540 (-)
CI01000030_08232550_08241049 NA coding downstream 126303 8232101 ~ 8241049 (-)
CI01000030_08201019_08203601 NA coding downstream 163707 8200166 ~ 8203645 (-)
CI01000030_08393024_08396689 NA coding upstream 11107 8391989 ~ 8396748 (-)
CI01000030_08399321_08402641 NA coding upstream 18281 8399163 ~ 8402924 (-)
CI01000030_08440613_08441821 NA coding upstream 59662 8440544 ~ 8441836 (-)
CI01000030_08450632_08457703 NA coding upstream 69294 8450176 ~ 8457975 (-)
CI01000030_08467514_08479103 NA coding upstream 86591 8467473 ~ 8479252 (-)
G163541 NA non-coding downstream 7616 8359522 ~ 8359736 (-)
G163540 NA non-coding downstream 10226 8356894 ~ 8357126 (-)
G163528 NA non-coding downstream 56220 8310901 ~ 8311132 (-)
G163520 NA non-coding downstream 82870 8284251 ~ 8284482 (-)
G163544 NA non-coding upstream 24118 8405000 ~ 8405234 (-)
G163549 NA non-coding upstream 43748 8424630 ~ 8424891 (-)
G163409 NA non-coding upstream 49070 8429952 ~ 8432173 (-)
G163403 NA non-coding upstream 82895 8463777 ~ 8466289 (-)
G163552 NA non-coding upstream 102523 8483405 ~ 8513971 (-)
CI01000030_08185866_08194632 NA other downstream 174866 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 574970 7788797 ~ 7792198 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other downstream 629348 7735436 ~ 7737720 (-)
G163139 NA other downstream 1217208 7149474 ~ 7150144 (-)
G163065 NA other downstream 1441695 6924483 ~ 6925657 (-)
G163873 NA other upstream 552531 8933413 ~ 8933982 (-)
CI01000030_09277337_09294501 NA other upstream 906324 9276431 ~ 9294802 (-)
G164071 NA other upstream 1094306 9475188 ~ 9476264 (-)
CI01000030_10103451_10131419 NA other upstream 1734633 10102944 ~ 10133765 (-)

Expression


Co-expression Network