G163409


Basic Information

Item Value
gene id G163409
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8429952 ~ 8432173 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU185657
GACATTTTTATTTGAAAGAAAGCTGTTTACAATGTCAAGAGCAGGAGTCAGCTCAAATCTTGAAGGGAAAAGAGATTACATATACGCCAACTCACAACTCTTTGAGTTGATCTGAATCTCACACTTGAAACTGCATGAAGATGAACTCTGTAACAAATTCAGATGATGTTTCATTGTCCTTTCACTTGTTGCAGATGGTTAGGGCAGATTTATATAGAAGAGATTTTATAGCTCATTAAGCTCAATGTTTTATTGGGTCACATTTGGTCAGGACACAGTATCACATTTGAATGTGCTGGATCTGAAGGTGAACTACTTGCAGTGATTTCAAACATTTGTTTTTTGTATGACTGAGTAAAGAAGATAAGACGACATGGAGGGCAATGTTACAGCTTGTCTCCAGTATGGATTCGCTTGTGTTTTTTCAGGTTTCCTGACTGACTGAATCTCTTGTCACAGTGTGAACACTTGTAAGGTTTCTCTCCAGTGTGGATCCTCTCATGTGCTTTCAGGTTTCCCGACTGCCTGAAAACCTTGTCACAGTGTGAACACTTGTAAGGATTTTCTCCTGTGTGGATCCGCTCATGTATTTTCAGATATTCTGACCATTTGAAACTCTTGTCGCAGTGTGAACACTTGTAAGGTTTTTCTCCAGTGTGGAACCGCTCATGTAATTTCAGATATTCTGACTGACTGAATCTCTTGTCACAGAATGAACACTCGTAAGGTTTTTCTCCAGTGTGCGTCCTCTCATGTATTTTCAGATGTCCTGACTGACTGAATCTCTTGTCGCAGTGTGAACACTTGTGAGGCTTTTCTCCAGTGTGGATTCTCTCGTGTGTTTTCAGAGAACCTAATCGATTGAATCTCTTGTCACAGTGTGAACACTTGTAAGGTTTTTCTCCAGTGTGGATCCTCTGATGCCGCTTCACTTCACCATCTGTAAAAAAGGTCTTCCCACAACCAAAACACACATGATTTTTCACACCGCTGTGTCTTTTCTGGTGTACTTTTAAGTTACTCAGCTGACTAAAACTATTTCCACAGAAAGAACACATGTAAGGCTTCTCCTGTGTATGAATATTCATGTGGTCCTTCAGTGTACGTGCCCTAAAAAATGTTTTACCGCACTGATCACAGGTAAATGGTTTTTCTCCAGAATGAGAATGCACATGTAAATTAAAAGCGCTTACACGTGTGAAACTCTTCCCACACTGATCACATGTGTGCGGCTTCTCTCCAGTGTGGATTGTCATGTGTTCATTAAGGGCTCTTCTTTTTGTGAAACTCTTCCCACATTGATCACATGTGTGCGGATTCTCCCCGGTGTGGATTTTCATGTGTACATTAAGGGCTCTTCTTTTCGTGAAACTCTTCCCACACTGATCACACGTGTGTGGCTTCTCTCCAGTGTGGAATTTCATGTGAATTTTAAGGGTTCCTTGTTGTACAAAACTCTTCCCACATTGATCACATGTGTGTGGTTTCTGTCCAGCGTGGATTTTCATGTGTCTCTTCAGACTTGCTTTTTCTGTAAAACTCTTCCCACACTGAAGGCAGGTGAAAGATTTTTTCAATAAATTGCTTTCAGTCTGTGAGTGACTTGAATGTTTTTCACCAGTTTTGACATGATGTTTCTCCTTTGCTTCTCTCAGTTCTTCACTCTCCTTGTTGTCTTCCATCAGGTCTAAAATGAAAGAAAAGTTAAATTTTCAGTAATCATAAAATGTAGAAAAATGAGAAGGGAAAGGACAAAAAAAGTTACCTTGATGTAATATCAGAATGAAGCCATTACCTATTTTTTCTCCTTTTTTCAGATATTTTCTGAAATCTGATATATATATCCATTTCCAAATCGCTTATCCTATGTAGGGTCACAGCGATCCTGGATATTATCAGCGTCTCACACCATAGGCGAGGAAACACACTGGATTGATTCACACAGAGTTCACAGATTACAGTGTTCACAGATAGGGTAACTTGCTTTGCTTTAATTACTAAAAATAGTGCTGTCAGCATGTATTTGTGACAAAATTATAAAAATAAATAAAACATTAATAAATCTGATAACATGCCATTCAAGGTGAACATTAATTAAATTATGATTTGGTTTACAGATAAACCAGTAGAAATTTGGCAATAAATTTTATATTACCATCATGGCTACATTTACAAAACCTTGCAGTGTTGCTTTGCTATGAACGTTTATCCTAGTATTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185657 True 2222 lncRNA 0.38 1 8429952 8432173

Neighbor

gene id symbol gene type direction distance location
CI01000030_08399321_08402641 NA coding downstream 27028 8399163 ~ 8402924 (-)
CI01000030_08393024_08396689 NA coding downstream 33204 8391989 ~ 8396748 (-)
CI01000030_08367669_08379327 NA coding downstream 49070 8367352 ~ 8380882 (-)
CI01000030_08350086_08366927 NA coding downstream 62873 8349698 ~ 8367079 (-)
CI01000030_08335819_08343892 NA coding downstream 84054 8335563 ~ 8345898 (-)
CI01000030_08440613_08441821 NA coding upstream 8371 8440544 ~ 8441836 (-)
CI01000030_08450632_08457703 NA coding upstream 18003 8450176 ~ 8457975 (-)
CI01000030_08467514_08479103 NA coding upstream 35300 8467473 ~ 8479252 (-)
CI01000030_08479752_08485957 NA coding upstream 47478 8479651 ~ 8487329 (-)
CI01000030_08492487_08494184 NA coding upstream 60129 8492302 ~ 8494331 (-)
G163549 NA non-coding downstream 5061 8424630 ~ 8424891 (-)
G163544 NA non-coding downstream 24718 8405000 ~ 8405234 (-)
G163543 NA non-coding downstream 54889 8374785 ~ 8375063 (-)
G163541 NA non-coding downstream 70216 8359522 ~ 8359736 (-)
G163540 NA non-coding downstream 72826 8356894 ~ 8357126 (-)
G163403 NA non-coding upstream 31604 8463777 ~ 8466289 (-)
G163552 NA non-coding upstream 51232 8483405 ~ 8513971 (-)
G163554 NA non-coding upstream 71831 8504004 ~ 8516535 (-)
G163565 NA non-coding upstream 179748 8611921 ~ 8612120 (-)
G163567 NA non-coding upstream 187009 8619182 ~ 8619400 (-)
CI01000030_08185866_08194632 NA other downstream 237466 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 637570 7788797 ~ 7792198 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other downstream 691948 7735436 ~ 7737720 (-)
G163139 NA other downstream 1279808 7149474 ~ 7150144 (-)
G163065 NA other downstream 1504295 6924483 ~ 6925657 (-)
G163873 NA other upstream 501240 8933413 ~ 8933982 (-)
CI01000030_09277337_09294501 NA other upstream 855033 9276431 ~ 9294802 (-)
G164071 NA other upstream 1043015 9475188 ~ 9476264 (-)
CI01000030_10103451_10131419 NA other upstream 1683342 10102944 ~ 10133765 (-)

Expression


Co-expression Network