CI01000030_08393024_08396689



Basic Information


Item Value
gene id CI01000030_08393024_08396689
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8391989 ~ 8396748 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000030_08393024_08396689.mRNA
AAACGCGCTCTACTAAATCATGAGGAGTTTTTTGATCGGATATTCAGGGAACTGTGAATATGATTCATAAATCTTTCTTCTTCTGCCTGTGGATTTGGTTCTCACGTGGTGTGTTTGGTGTTCATATAGATGAAGTGAAATCAGTGTCAGTGATGGAGGGAGATTCTGTCACTCTTAACACTGATGTTAAAGTACAGAAGGATGATCAGATACTGTGGGTTTATAGACTTGGCAGTTCAGAGACTCGTATAGCAGAAATCCACAGACAGAGTGTTTATATGCATAACAGTAATGTGACATTTGGTGGCAGACTGAGAATGGACAAACTGAAGTCATCACATTGGGTGGGAATATTGGTTAGTTTAGTGATACTGGCTGTATTAGCTGTGGCGGCAATAATCTTTCTCAGAAGCAAGAGCAAACAAGCACAACCACAAAATGGCAAAAACCTCAGCTTTTACCACAGATGCTCAGAAAAGAGCCGTTTGCGCTTATGTGTCAAAGCAGTAGCTGTGTCATCCTGTGCTGATAAAGCTAATGGAGAAGACCACATCATATACTCGAGTATTAATCTAACTTGACATATTCATTGCATGTCCATGTTAAAAATGCTGTTTTTATTTTATTTGAGACATTTTTCTCAACATTTTCTGTGACTAATACAAAGCACAGTGTTATCCATTTTAGTCCTACAGTGACCTTCCATCCTGCTCTAACTTGTTTTGCAGTTAGCTGCTTACCTGTTAGACAAGACATGTGCATGCAAGCTCAGCTCCATTAATGGAAACATTCCACCCTTCTTTGAGATTTTAACTGTGAGCTCAATACATGCTGTATATTATAAGCACACATACACAATCATATTACTCTCAATTAAGTCAATTGCTGTAGCACTACACATCAACCTTAACAAAAACTGCTTTCAGCTCTTTTAAAAATGTCCTGACGGGGACGTGGACGGATTTTCCTACTTTTTTATCTCTAGCTGATCACATGCCTGATATATATATATTTGTACATTTTGTGTACATTTTTATATATGTTTTGTATGTTTTATTGATAGATTTTTGGACCAATATTTTCTTAAATGTGTTATTTACTCTTTTATATTAAGACCAACATTTCTAAGCACCAGCTAAAAATTTGGTTGTTTTCACAAGATTAGTGTGAAGTTTGAATTTATCATGTTTTGGACACCATCCGGTTTCTGCTCTTCTGATTCCTGTTCCAGCTGAGAAACTGCCATTAATATGAATGACAATGCTAACAGATAACTTGTCGTTTGCTCATTTTATAAAAAGTTAGTTTAGTTGTTAAGCTTGTCAGATTGGACATGTTCATGAAAGCTGAGCTCAATGCAGGAATCTTTGCATCCTTAAGATGCTTTCTTTGAGCTCAGCAGGAAAAAAAAAATGCTTTTTATGTAAAAACTGTTCTTAAAGTGCACTTATCCTCAGTGTTTTGTGTAGTGTTCCCTACTCACACTTACATGCTAATACTATTTTTAAGTCATAGAGTAGTAACATGTCAATCTTAACAAAACCCTTTGGTATTTTTTCACCATCTAGTGAACACTCCATGTGTAAACATTGTTTAATAAGTGTTGTGCCAATAAA

Function


NR:

description
Si:ch211-222k6.3

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000030_08393024_08396689.mRNA True 1616 mRNA 0.36 5 8391989 8396748

Neighbor


gene id symbol gene type direction distance location
CI01000030_08367669_08379327 NA coding downstream 11107 8367352 ~ 8380882 (-)
CI01000030_08350086_08366927 NA coding downstream 24910 8349698 ~ 8367079 (-)
CI01000030_08335819_08343892 NA coding downstream 46091 8335563 ~ 8345898 (-)
CI01000030_08328834_08331465 NA coding downstream 60449 8328102 ~ 8331540 (-)
CI01000030_08232550_08241049 NA coding downstream 150940 8232101 ~ 8241049 (-)
CI01000030_08399321_08402641 NA coding upstream 2415 8399163 ~ 8402924 (-)
CI01000030_08440613_08441821 NA coding upstream 43796 8440544 ~ 8441836 (-)
CI01000030_08450632_08457703 NA coding upstream 53428 8450176 ~ 8457975 (-)
CI01000030_08467514_08479103 NA coding upstream 70725 8467473 ~ 8479252 (-)
CI01000030_08479752_08485957 NA coding upstream 82903 8479651 ~ 8487329 (-)
G163543 NA non-coding downstream 16926 8374785 ~ 8375063 (-)
G163541 NA non-coding downstream 32253 8359522 ~ 8359736 (-)
G163540 NA non-coding downstream 34863 8356894 ~ 8357126 (-)
G163528 NA non-coding downstream 80857 8310901 ~ 8311132 (-)
G163544 NA non-coding upstream 8252 8405000 ~ 8405234 (-)
G163549 NA non-coding upstream 27882 8424630 ~ 8424891 (-)
G163409 NA non-coding upstream 33204 8429952 ~ 8432173 (-)
G163403 NA non-coding upstream 67029 8463777 ~ 8466289 (-)
G163552 NA non-coding upstream 86657 8483405 ~ 8513971 (-)
CI01000030_08185866_08194632 NA other downstream 199503 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 599607 7788797 ~ 7792198 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other downstream 653985 7735436 ~ 7737720 (-)
G163139 NA other downstream 1241845 7149474 ~ 7150144 (-)
G163065 NA other downstream 1466332 6924483 ~ 6925657 (-)
G163873 NA other upstream 536665 8933413 ~ 8933982 (-)
CI01000030_09277337_09294501 NA other upstream 890458 9276431 ~ 9294802 (-)
G164071 NA other upstream 1078440 9475188 ~ 9476264 (-)
CI01000030_10103451_10131419 NA other upstream 1718767 10102944 ~ 10133765 (-)

Expression



Co-expression Network