CI01000030_08492487_08494184


Basic Information

Item Value
gene id CI01000030_08492487_08494184
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8492302 ~ 8494331 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_08492487_08494184.mRNA
AGAGAGCGAGACGGGGAACACAGACCACTAAAACCAACTTGCTTTTGGTTTAGCAATCTAGATTTGAGGAACAGCTGCCTTTTTAAATCAGGAAGTCACTCTTCTGTGTCTGAAGTGACTCTCGGCTGGACGTTTGTTTCTGTCACGATGTCCTCTCATCTGTGCGCTCTGATCCTGTTTGTCCTGAGCGATGAAGTGAAGTTAGTGTCAATGAGAGAGGGACAATATGTCACTCTAAACACTGATGTTACTGAAGTACAGAGAGATGATCAGATAGTGTGGTTTTTTGGACCTCAAGAGACTCGTATAGCTGAAATATATAACCAGAACATTGATATAAATAAGAGTGATGAGCTATTTGGACACAGACTCCAGATGGACAGTCAAACTGGATCTCTGACCATCATGGACATCGGGACTGCACACACTGGACTTTATAAACTACAGATCATCAGCATCAGAGGAACTTCATACAAGAGATTCAATGTTATTGTTTATTTGTTTAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCTTCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGAAACCAGACCAAACATCTCACATCCAAGGAACTCTGTCACACATTTGCAAATCAGAAAAGCATGTCAGAATACACAGAGATCATCTACCGTCTTCAGATCTGACACCACTGATCATCACTCATGATCCCCACGTCTCATGATTTTACATCCAATATAACCGATTCATTTTATTCATGATGAAGCTTCATGTACATCTGCTTCCAGAGATCAAGCTAAACTGGATCACAACATGAATTGTTATTACAGATAATTTTTCATTCACAGTTTGATGAAATTGTATCAATAAA

Function

NR:

description
Si:ch211-222k6.3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_08492487_08494184.mRNA True 944 mRNA 0.40 4 8492302 8494331

Neighbor

gene id symbol gene type direction distance location
CI01000030_08479752_08485957 NA coding downstream 4973 8479651 ~ 8487329 (-)
CI01000030_08467514_08479103 NA coding downstream 13050 8467473 ~ 8479252 (-)
CI01000030_08450632_08457703 NA coding downstream 34327 8450176 ~ 8457975 (-)
CI01000030_08440613_08441821 NA coding downstream 50466 8440544 ~ 8441836 (-)
CI01000030_08399321_08402641 NA coding downstream 89378 8399163 ~ 8402924 (-)
CI01000030_08498082_08533503 NA coding upstream 3496 8497827 ~ 8534156 (-)
CI01000030_08543066_08553404 STRIP1 coding upstream 48454 8542785 ~ 8553914 (-)
CI01000030_08561763_08584396 CACNA2D2, CACNA2D2B coding upstream 67432 8561763 ~ 8584396 (-)
CI01000030_08597072_08624990 NA coding upstream 102625 8596956 ~ 8625419 (-)
CI01000030_08638306_08669065 NA coding upstream 143287 8637618 ~ 8669065 (-)
G163403 NA non-coding downstream 26013 8463777 ~ 8466289 (-)
G163409 NA non-coding downstream 60129 8429952 ~ 8432173 (-)
G163549 NA non-coding downstream 67411 8424630 ~ 8424891 (-)
G163544 NA non-coding downstream 87068 8405000 ~ 8405234 (-)
G163543 NA non-coding downstream 117239 8374785 ~ 8375063 (-)
G163554 NA non-coding upstream 9673 8504004 ~ 8516535 (-)
G163565 NA non-coding upstream 117590 8611921 ~ 8612120 (-)
G163567 NA non-coding upstream 124851 8619182 ~ 8619400 (-)
G163568 NA non-coding upstream 125285 8619616 ~ 8621931 (-)
G163575 NA non-coding upstream 155922 8650253 ~ 8650577 (-)
CI01000030_08185866_08194632 NA other downstream 299816 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 699920 7788797 ~ 7792198 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other downstream 754298 7735436 ~ 7737720 (-)
G163139 NA other downstream 1342158 7149474 ~ 7150144 (-)
G163065 NA other downstream 1566645 6924483 ~ 6925657 (-)
G163873 NA other upstream 439082 8933413 ~ 8933982 (-)
CI01000030_09277337_09294501 NA other upstream 792875 9276431 ~ 9294802 (-)
G164071 NA other upstream 980857 9475188 ~ 9476264 (-)
CI01000030_10103451_10131419 NA other upstream 1621184 10102944 ~ 10133765 (-)

Expression


Co-expression Network