G160723


Basic Information

Item Value
gene id G160723
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 5403227 ~ 5406793 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU182454
AATGTTCAATTATAGCACATTAAAAGAAATCAATTTGAAACTGCACTTTATTTACAGCATCTCGAAGCTAACGTGCCATTTTACAGCACAGACCCTAATATGTGCCAATAAAACAGTCATCCACAACATTTAAAAGGTAAAACAAAACAATAAAAAAATATATATACACAAAAAAAAAAAAAAAAAAACATATTTACAAAGCCAACAGGGTGCGCAATTTTGAGCAACAAACACTTTGGCAGCACACAAATTTATAACTTTTTTTCTTGCTGCAATATTTTCAAGGCACAAGGGCCAGAGCATTAACCAGCATCTGAATAGCACAAAGAGGATCTACGATGTCCTTCATTTTGTTACGGCATAGAACCCAGTCTGGAGCAAACCTGGTCACTGGTTTTGACTTCCGAGGGGTGGCTTGGAGAAGGAAACTTCCATTGAGAGATGTGTTCATTTTCTGCTTGACTTTGTTTCTCTCAGTATCCATTTTGTACTTTCGAAGCCCAAGTCGGTAGATGCTACGAATGCGATCCGAAACCTTCGGTAGCTTTCGGACCTCCATTGCTCTCCTTTCATCCTGGACCAAGAGAACCAAGAGAAAACAAGCTTTGGTGAAGATGCTGCCACCTTTTTCTGCAACCTTATCTCCAGCTTTCTCCCGGTAGATCTGCAGAAGATCCAGGAGGGTTTCTACAGAGTTGTCCACATCATAAACTGCATCAATGGTTCTGTTGTGTTTTGATAGGTTGAGAAGGACTTGGATGGATAATGTGATGATCTCCATTGAAGGCACACTTCGGTTGCAGCTCCTTATCAAAGTGAAGATGGTGTGCGTTGCTCCACTTTCAACAAGACGTTCACAGCACTCTGGTGAAAGTCTGGTGGCAGTTTCTAAATGTTTCAAGGCTGCAAGAATGTAAGCATAATTCTGAAGTCCAAGCAGGTAGCTCAACGCTGTTGTGGTCTTGTTACACAGCTTGTCCTCTTCCTTCACCCTTCGATTTACTTCCCTGAGACGCCGCCTCATGGAAATGACATTGCTTGTGTCATGATATTTTCTTGAACAATGACCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182454 True 1071 lncRNA 0.41 5 5403227 5406793

Neighbor

gene id symbol gene type direction distance location
CI01000030_05357534_05377672 CRB1 coding downstream 25555 5357466 ~ 5377672 (-)
CI01000030_05261553_05285669 NA coding downstream 117116 5261296 ~ 5286111 (-)
CI01000030_05233712_05242487 LHX9 coding downstream 160740 5233466 ~ 5242487 (-)
CI01000030_05165181_05189898 NEK7 coding downstream 213187 5164955 ~ 5190040 (-)
CI01000030_05080350_05087998 NA coding downstream 315229 5080350 ~ 5087998 (-)
CI01000030_05477128_05482150 NA coding upstream 70335 5477128 ~ 5482150 (-)
CI01000030_05519604_05542781 NA coding upstream 112753 5519546 ~ 5542807 (-)
CI01000030_05561747_05564633 NA coding upstream 154954 5561747 ~ 5564710 (-)
CI01000030_05784109_05788689 NA coding upstream 377023 5783816 ~ 5788689 (-)
CI01000030_05791222_05793350 NA coding upstream 384260 5791053 ~ 5793350 (-)
G160613 NA non-coding downstream 258964 5143683 ~ 5144263 (-)
G160602 NA non-coding downstream 260007 5142670 ~ 5143220 (-)
G160706 NA non-coding downstream 273217 5129016 ~ 5130010 (-)
G160704 NA non-coding downstream 274912 5127877 ~ 5128315 (-)
G160710 NA non-coding upstream 9528 5416321 ~ 5519953 (-)
G160711 NA non-coding upstream 43773 5450566 ~ 5477650 (-)
G160735 NA non-coding upstream 66771 5473564 ~ 5476892 (-)
G160784 NA non-coding upstream 146252 5553045 ~ 5553284 (-)
G160732 NA non-coding upstream 149159 5555952 ~ 5556463 (-)
CI01000030_03491770_03493119 CELF5A other downstream 1910127 3490119 ~ 3493741 (-)
G160213 NA other downstream 1934065 3466353 ~ 3469162 (-)
G158980 NA other downstream 2870663 2499584 ~ 2536375 (-)
G158914 NA other downstream 2951509 2450849 ~ 2451718 (-)
CI01000030_02155901_02157314 NA other downstream 3243936 2155584 ~ 2157390 (-)
G160713 NA other upstream 12326 5419119 ~ 5423513 (-)
G160712 NA other upstream 50167 5456960 ~ 5512074 (-)
G160949 NA other upstream 390504 5797297 ~ 5800426 (-)
CI01000030_06131710_06138371 NA other upstream 726582 6131090 ~ 6138406 (-)
CI01000030_06701334_06704398 MGC53794, FAM195A, FAM195A.S, MCRIP2 other upstream 1294262 6701055 ~ 6704745 (-)

Expression


Co-expression Network