G215380


Basic Information

Item Value
gene id G215380
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 4923602 ~ 4923836 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU244347
CACCATTTCATGCTTTTCATCTTCAGAAAGATCTTTCTTCCTCCCCATATTGCATGAGAACTGTGACTTGCTTAATAATGTGGAACAACCTCTAAGTAGGGTTTCCATAGACCTGGCAAATTATTTTGTCTGAGATTGATACCAGTTATCTAAAAAATTTTCTTAGAAAAACTAAAATCTAAATGTTTATTCTACTGAAATCTTACTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244347 True 210 lncRNA 0.32 2 4923602 4923836

Neighbor

gene id symbol gene type direction distance location
CI01000050_04865991_04906702 AGTPBP1 coding upstream 16187 4865906 ~ 4907415 (+)
CI01000050_04759894_04762802 NA coding upstream 160501 4759823 ~ 4763101 (+)
CI01000050_04700488_04701991 NA coding upstream 221562 4700344 ~ 4702040 (+)
CI01000050_04617015_04691858 ANTXR1A, ANTXRL, ANTXR1 coding upstream 231628 4616737 ~ 4691974 (+)
CI01000050_04591548_04592778 NA coding upstream 330724 4589926 ~ 4593049 (+)
CI01000050_05014220_05023731 NA coding downstream 90384 5014220 ~ 5024172 (+)
CI01000050_05027317_05033248 CUNH9ORF64, C5H9ORF64 coding downstream 103481 5027317 ~ 5033302 (+)
CI01000050_05034897_05045722 GKAP1 coding downstream 111061 5034897 ~ 5045957 (+)
CI01000050_05069414_05117314 FRMD3 coding downstream 145578 5069414 ~ 5117314 (+)
CI01000050_05160439_05203170 NA coding downstream 236081 5159917 ~ 5203373 (+)
G215332 NA non-coding upstream 70191 4810229 ~ 4853411 (+)
G215361 NA non-coding upstream 76393 4846402 ~ 4847209 (+)
G215319 NA non-coding upstream 144344 4770939 ~ 4779258 (+)
G215309 NA non-coding upstream 174691 4748641 ~ 4748911 (+)
G215358 NA non-coding downstream 142970 5066806 ~ 5089579 (+)
G215348 NA non-coding downstream 198869 5122705 ~ 5127959 (+)
G215478 NA non-coding downstream 355536 5279372 ~ 5312891 (+)
G215474 NA non-coding downstream 361803 5285639 ~ 5287362 (+)
G215499 NA non-coding downstream 466113 5389949 ~ 5390319 (+)
G214717 NA other upstream 815322 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 966558 3931890 ~ 3957044 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other upstream 1114863 3805143 ~ 3808870 (+)
CI01000050_02852118_02864754 RNF122 other upstream 2057780 2852118 ~ 2865822 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 483749 5407585 ~ 5409417 (+)
G215539 NA other downstream 705774 5629610 ~ 5631203 (+)
G215773 NA other downstream 1737352 6661188 ~ 6665703 (+)

Expression


Co-expression Network