G215499


Basic Information

Item Value
gene id G215499
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 5389949 ~ 5390319 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU244472
CTGGAATCTCCTCCATACTATTGAGACTGTGCTGGGAGACACAGCAAACCTTCTGGCAATGGCACGTATTGATGTGCCATCCCGGAGGAGTTGGACTGCCTGTGCAACCTCTGTAGGGCCCAGGTATCTCCTCATGCTACCAGTAGTGACACTGACCCTAGCCAAATGCAAAACTAGTGAAAAACAGTCAGAAAAGATGAGTAGGGAAAAAAATGCCAGTGGCCTCCACCTGTAAAACCATTCCTGTTTTGGGGGTCGTCTCATTGTTGCCCATCTAGTGCACCTGTTGTTAATTTCATTAACACCAAAGCAGCTGAAACTGATTAACAACCCCCTCTGATACTTAACTGACCAGATCAATATCCCAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244472 True 371 lncRNA 0.47 1 5389949 5390319

Neighbor

gene id symbol gene type direction distance location
CI01000050_05382547_05383818 NA coding upstream 6083 5382043 ~ 5383866 (+)
CI01000050_05362253_05376134 PRICKLE3 coding upstream 12435 5362253 ~ 5377514 (+)
CI01000050_05327777_05328382 PLP2 coding upstream 61550 5327777 ~ 5328399 (+)
CI01000050_05300337_05306942 SYP, SYPB coding upstream 83007 5300337 ~ 5306942 (+)
CI01000050_05220463_05237857 OPN7D coding upstream 151602 5220463 ~ 5238347 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A coding downstream 17363 5407585 ~ 5409417 (+)
CI01000050_05529488_05530765 NA coding downstream 136843 5527162 ~ 5531422 (+)
CI01000050_05545206_05550365 NA coding downstream 153195 5543514 ~ 5550550 (+)
CI01000050_05774182_05793383 WRAP73 coding downstream 383863 5774182 ~ 5793898 (+)
CI01000050_05819139_05823958 NA coding downstream 428755 5819074 ~ 5823958 (+)
G215478 NA non-coding upstream 77058 5279372 ~ 5312891 (+)
G215474 NA non-coding upstream 102587 5285639 ~ 5287362 (+)
G215348 NA non-coding upstream 261990 5122705 ~ 5127959 (+)
G215358 NA non-coding upstream 300370 5066806 ~ 5089579 (+)
G215380 NA non-coding upstream 466113 4923602 ~ 4923836 (+)
G215500 NA non-coding downstream 13606 5403925 ~ 5404270 (+)
G215503 NA non-coding downstream 28841 5419160 ~ 5421264 (+)
G215511 NA non-coding downstream 65015 5455334 ~ 5455585 (+)
G215527 NA non-coding downstream 168010 5558329 ~ 5558638 (+)
CI01000050_04591548_04592778 NA other upstream 796900 4589926 ~ 4593049 (+)
G214717 NA other upstream 1281669 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 1432905 3931890 ~ 3957044 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other upstream 1581210 3805143 ~ 3808870 (+)
CI01000050_02852118_02864754 RNF122 other upstream 2524127 2852118 ~ 2865822 (+)
G215539 NA other downstream 239291 5629610 ~ 5631203 (+)
G215773 NA other downstream 1270869 6661188 ~ 6665703 (+)

Expression


Co-expression Network