Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006252621.1 |
| length | 218 |
| lncRNA type | inter_gene |
| GC content | 0.60 |
| exon number | 3 |
| gene id | LOC122358536 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056713.1 |
| NCBI id | CM032082.1 |
| chromosome length | 23709629 |
| location | 10284022 ~ 10284472 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006252600.1 | lncRNA | downstream | 14054 | 10269204 ~ 10269968 (-) | True | LOC122358386 |
| TU155586 | lncRNA | downstream | 32027 | 10245464 ~ 10251995 (-) | True | G105362 |
| TU155587 | lncRNA | downstream | 33897 | 10249808 ~ 10250125 (-) | True | G105363 |
| TU155585 | lncRNA | downstream | 34413 | 10243948 ~ 10249609 (-) | True | G105361 |
| TU155556 | lncRNA | downstream | 108423 | 10173478 ~ 10175599 (-) | True | G105339 |
| TU155594 | lncRNA | upstream | 5004 | 10289476 ~ 10289849 (-) | True | G105368 |
| TU155605 | lncRNA | upstream | 17924 | 10302396 ~ 10305221 (-) | True | G105378 |
| TU155601 | lncRNA | upstream | 37016 | 10321488 ~ 10325416 (-) | True | G105375 |
| TU155622 | lncRNA | upstream | 42612 | 10327084 ~ 10327564 (-) | True | G105389 |
| TU155634 | lncRNA | upstream | 52298 | 10336770 ~ 10337285 (-) | True | G105396 |
| XM_043258493.1 | mRNA | downstream | 2574 | 10279272 ~ 10281448 (-) | True | LOC122358610 |
| XM_043258492.1 | mRNA | downstream | 8054 | 10272889 ~ 10275968 (-) | True | LOC122358609 |
| XM_043258490.1 | mRNA | downstream | 11939 | 10270001 ~ 10272083 (-) | True | LOC122358608 |
| XM_043258489.1 | mRNA | downstream | 17342 | 10264468 ~ 10266680 (-) | True | LOC122358607 |
| XM_043258488.1 | mRNA | downstream | 22855 | 10259235 ~ 10261167 (-) | True | LOC122358606 |
| XM_043258197.1 | mRNA | upstream | 54062 | 10338534 ~ 10342890 (-) | True | tubd1 |
| XM_043259008.1 | mRNA | upstream | 135782 | 10420254 ~ 10429603 (-) | True | LOC122358984 |
| XM_043258494.1 | mRNA | upstream | 228159 | 10512631 ~ 10513887 (-) | True | atf5b |
| XM_043259252.1 | mRNA | upstream | 297731 | 10582203 ~ 10637949 (-) | True | phldb1b |
| XM_043259253.1 | mRNA | upstream | 297731 | 10582203 ~ 10629631 (-) | False | phldb1b |
| unassigned_transcript_2150 | other | downstream | 80609 | 10203327 ~ 10203413 (-) | True | trnastop-uca |
| TU155454 | other | downstream | 487132 | 9763871 ~ 9796890 (-) | True | dynll2a |
| TU155453 | other | downstream | 487132 | 9793748 ~ 9796890 (-) | False | dynll2a |
| TU155158 | other | downstream | 728235 | 9552634 ~ 9555787 (-) | True | G105059 |
| TU155104 | other | downstream | 847225 | 9434426 ~ 9436797 (-) | False | G105022 |
| TU155809 | other | upstream | 228722 | 10513194 ~ 10514062 (-) | False | atf5b |
| TU155899 | other | upstream | 374465 | 10658937 ~ 10661150 (-) | False | cryaba |
| TU156055 | other | upstream | 801347 | 11085819 ~ 11092713 (-) | False | igsf9ba |
| TU156117 | other | upstream | 1018949 | 11303421 ~ 11304562 (-) | False | LOC122358622 |
| TU156125 | other | upstream | 1045430 | 11329902 ~ 11331898 (-) | False | LOC122358625 |
