Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043222617.1 |
| length | 2547 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 8 |
| gene id | c22h19orf44 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056720.1 |
| NCBI id | CM032089.1 |
| chromosome length | 18002998 |
| location | 2968495 ~ 2977582 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0043254 | regulation of protein-containing complex assembly | biological_process |
| GO:0044087 | regulation of cellular component biogenesis | biological_process |
| GO:0008154 | actin polymerization or depolymerization | biological_process |
| GO:1902903 | regulation of supramolecular fiber organization | biological_process |
| GO:0030163 | protein catabolic process | biological_process |
| GO:0009056 | catabolic process | biological_process |
| GO:1901565 | organonitrogen compound catabolic process | biological_process |
| GO:0009057 | macromolecule catabolic process | biological_process |
| GO:1901575 | organic substance catabolic process | biological_process |
| GO:0090066 | regulation of anatomical structure size | biological_process |
| GO:0051493 | regulation of cytoskeleton organization | biological_process |
| GO:0032956 | regulation of actin cytoskeleton organization | biological_process |
| GO:0007015 | actin filament organization | biological_process |
| GO:0032970 | regulation of actin filament-based process | biological_process |
| GO:0051258 | protein polymerization | biological_process |
| GO:0097435 | supramolecular fiber organization | biological_process |
| GO:0044257 | cellular protein catabolic process | biological_process |
| GO:0044265 | cellular macromolecule catabolic process | biological_process |
| GO:0030832 | regulation of actin filament length | biological_process |
| GO:0030833 | regulation of actin filament polymerization | biological_process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| GO:0033043 | regulation of organelle organization | biological_process |
| GO:0030041 | actin filament polymerization | biological_process |
| GO:0110053 | regulation of actin filament organization | biological_process |
| GO:0008064 | regulation of actin polymerization or depolymerization | biological_process |
| GO:0032535 | regulation of cellular component size | biological_process |
| GO:0032271 | regulation of protein polymerization | biological_process |
| GO:0008537 | proteasome activator complex | cellular_component |
| GO:1902494 | catalytic complex | cellular_component |
| GO:0004197 | cysteine-type endopeptidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU220052 | lncRNA | upstream | 12509 | 2959100 ~ 2960828 (+) | False | LOC122327475 |
| XR_006247702.1 | lncRNA | upstream | 117253 | 2806603 ~ 2856084 (+) | True | LOC122327636 |
| TU220009 | lncRNA | upstream | 135388 | 2770775 ~ 2837949 (+) | False | G148781 |
| TU220010 | lncRNA | upstream | 144506 | 2770775 ~ 2828831 (+) | False | G148781 |
| TU220005 | lncRNA | upstream | 186301 | 2770775 ~ 2787036 (+) | True | G148781 |
| TU220076 | lncRNA | downstream | 12703 | 2990285 ~ 2992412 (+) | True | G148830 |
| TU220073 | lncRNA | downstream | 13717 | 2991299 ~ 2992412 (+) | False | G148830 |
| TU220266 | lncRNA | downstream | 124990 | 3102572 ~ 3102903 (+) | True | G148926 |
| TU220299 | lncRNA | downstream | 205946 | 3183528 ~ 3189154 (+) | True | G148942 |
| TU220336 | lncRNA | downstream | 247627 | 3225209 ~ 3226579 (+) | True | G148973 |
| XM_043222866.1 | mRNA | upstream | 10334 | 2959108 ~ 2963003 (+) | True | LOC122327475 |
| XM_043223945.1 | mRNA | upstream | 97421 | 2868088 ~ 2875916 (+) | True | cers4a |
| XM_043223081.1 | mRNA | upstream | 188807 | 2770754 ~ 2784530 (+) | True | LOC122327634 |
| XM_043223804.1 | mRNA | upstream | 213900 | 2752641 ~ 2759437 (+) | False | timm44 |
| XM_043222739.1 | mRNA | downstream | 57476 | 3035058 ~ 3040559 (+) | True | atcaya |
| XM_043222740.1 | mRNA | downstream | 59086 | 3036668 ~ 3040559 (+) | False | atcaya |
| XM_043222998.1 | mRNA | downstream | 63934 | 3041516 ~ 3044491 (+) | True | LOC122327553 |
| XM_043222999.1 | mRNA | downstream | 63939 | 3041521 ~ 3044491 (+) | False | LOC122327553 |
| XM_043222643.1 | mRNA | downstream | 67056 | 3044638 ~ 3048132 (+) | True | loxl5a |
| TU219297 | other | upstream | 827777 | 2143885 ~ 2145560 (+) | True | G148388 |
| unassigned_transcript_2538 | other | upstream | 843196 | 2130069 ~ 2130141 (+) | True | trnam-cau_117 |
| TU219247 | other | upstream | 1116202 | 1854873 ~ 1857135 (+) | False | LOC122327951 |
| XR_006247737.1 | other | upstream | 1334331 | 1626562 ~ 1639006 (+) | False | LOC122327950 |
| TU219153 | other | upstream | 1348147 | 1624472 ~ 1625190 (+) | True | G148295 |
| XR_006247636.1 | other | downstream | 67056 | 3044638 ~ 3047776 (+) | False | loxl5a |
| XR_006247629.1 | other | downstream | 136620 | 3114202 ~ 3152565 (+) | False | LOC122327293 |
| XR_006247630.1 | other | downstream | 136620 | 3114202 ~ 3152436 (+) | False | LOC122327293 |
| TU220335 | other | downstream | 246046 | 3223628 ~ 3224490 (+) | False | tma7 |
| TU220341 | other | downstream | 251685 | 3229267 ~ 3235787 (+) | False | dnase1l4.2 |
