RNA id: XM_043222735.1


Basic Information

Item Value
RNA id XM_043222735.1
length 1449
RNA type mRNA
GC content 0.37
exon number 7
gene id LOC122327394
representative False

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3821995 ~ 3830667 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATAGCTGCCAgaacagtttactaaaactcgaCCTCACATCAGCTCGTCGGTCATATTATTACTGATCAAGTTCTGAACAGCTTGTCTTTACATATTTGTGGACCGAAACCTGAAGATGTCTAACAGATTGTGgttctgtttgtgtttatggCGTCTGATTGgtgtgtttggtggAGAAATAAAGTTTGTGAAAATTGGAGAATCAGTGACTCTCAACTCTGATTTTACTGAAATGATGGATGATGATAAGATTCAGTGGaggtttaaaaatactttaatcgCTGAAATCAATGCAACAGCTGACATCATGACTGTGtatgatgatgttcttgacgggagattcagagacagactgaagatgaacgatcaaactggatctctgaccatcactaACATCACAATGAAACATGCTGGAGATTATGAACTAGAGATCAACAATATGAGCAAGAATTTCTTTCTCCGTGTCTATGATGAAATCCCACTGAAGGAGGGAGAATCAGTCACTCTAAACACTCATCTTACTCAAATAATGGATGATGATCGGATTCAGTGGAGagacagactgaagatggacgatcaaactggatctctgaccatcatgaacaccaCAATGAAACATGTTGGACATTATATTCTACAGTTCAACAACATGCACATGTTTTTCTTCCTCACTGTCTATGATGATATATCAGTGaaggagggagattcagtcactctcaACTCTGATCTTACTCAAATaatggatgatgatgagatTCAGTGGTGGTTTGGAAATGAAATCACTTTAATAGCTGGAATCAGTAAACAGGCCAACATCACGACTGTatatgatgatgttcttgacgggagattcagagacagactgaagctggacaatcaaactggatctctgaccatcacagACATCACAATGAAACATAAAGGACGTTATCTTTTACTGATATTTGGATCAACAGAGTCATTAAAAGCTTTCAGAGTTTCTGTCTCTAACTCAGACTCTGAACACTGCTGTGGTTTTACTGAAGCTGTGATCCGATTGGTCCTCTCTGCTCTGGTGGGCGTGGCTACTGTCCTTCTTCTGGTTTATGACATCAGATCCAGAAGAGCTAAACGAGATCAAACACACGTTCACACAACAAgaaatattgaaatgtaaaGCAGATGCTGAACTTTAAAGCTTCTTCACGTGTGGtttgttatattaaatgcagattaccggtattatttaattttattatttagtacaatgtaaatgtattctaatattgttattattgcgATCAAGTTTAACCTCATATGAGGACATTATATTTCTCTGAGACTATATGATAGGTTGCTTCACCAGAATCACTCTCTTTGcttcatcttttaaaatgtctgaaattaatttaatgaagtAATTATGACATGAatatgtgtcatttttaaattgtgtgtcataaataaaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006247690.1 lncRNA upstream 49441 3771572 ~ 3772554 (+) True LOC122327609
TU220442 lncRNA upstream 219419 3602292 ~ 3602576 (+) True G149036
TU220441 lncRNA upstream 219863 3601741 ~ 3602132 (+) True G149035
TU220437 lncRNA upstream 220476 3600669 ~ 3601519 (+) True G149034
TU220641 lncRNA downstream 24216 3854883 ~ 3855624 (+) True G149160
TU220675 lncRNA downstream 48267 3878934 ~ 3880028 (+) True G149189
TU220688 lncRNA downstream 105807 3936474 ~ 3936925 (+) True G149201
TU220695 lncRNA downstream 130792 3961459 ~ 3987717 (+) True G149206
TU220714 lncRNA downstream 145258 3975925 ~ 4004581 (+) False G149211
XM_043223849.1 mRNA upstream 8954 3810802 ~ 3813041 (+) True LOC122328141
XM_043222776.1 mRNA upstream 23074 3796756 ~ 3798921 (+) True LOC122327419
XM_043223848.1 mRNA upstream 29137 3789764 ~ 3792858 (+) True LOC122328140
XM_043223847.1 mRNA upstream 35370 3785297 ~ 3786625 (+) True LOC122328139
XM_043223845.1 mRNA upstream 42319 3777584 ~ 3779676 (+) True LOC122328138
XM_043222808.1 mRNA downstream 140731 3971398 ~ 3992945 (+) True LOC122327441
XM_043222807.1 mRNA downstream 159303 3989970 ~ 3992945 (+) False LOC122327441
XM_043223855.1 mRNA downstream 217514 4048181 ~ 4050439 (+) True LOC122328148
XM_043222819.1 mRNA downstream 222860 4053527 ~ 4058293 (+) True LOC122327446
XM_043222818.1 mRNA downstream 223386 4054053 ~ 4058293 (+) False LOC122327446
TU220657 other upstream 43812 3777580 ~ 3778183 (+) False LOC122328138
TU220366 other upstream 226695 3592661 ~ 3595300 (+) True G148992
TU220371 other upstream 229622 3297373 ~ 3592373 (+) False LOC122327325
TU220637 other downstream 21396 3852063 ~ 3853371 (+) True G149157
TU220805 other downstream 406787 4237454 ~ 4238069 (+) False LOC122327447
XR_006247646.1 other downstream 882195 4712862 ~ 4715952 (+) True LOC122327517
TU221415 other downstream 1272862 5103529 ~ 5104436 (+) True G149646
TU221516 other downstream 1622498 5453165 ~ 5455427 (+) False LOC122327428

Expression Profile