Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043224010.1 |
| length | 1017 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 7 |
| gene id | ube2t |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056721.1 |
| NCBI id | CM032090.1 |
| chromosome length | 19062720 |
| location | 3694652 ~ 3697022 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0051865 | protein autoubiquitination | biological_process |
| GO:0006513 | protein monoubiquitination | biological_process |
| GO:0006281 | DNA repair | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004842 | ubiquitin-protein transferase activity | molecular_function |
| GO:0003682 | chromatin binding | molecular_function |
| id | description |
|---|---|
| K13960 | UBE2T, HSPC150; ubiquitin-conjugating enzyme E2 T |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006247817.1 | lncRNA | upstream | 8592 | 3678763 ~ 3686108 (+) | False | LOC122328634 |
| TU229049 | lncRNA | upstream | 11920 | 3678719 ~ 3682780 (+) | True | LOC122328634 |
| TU229041 | lncRNA | upstream | 37295 | 3657099 ~ 3657405 (+) | True | G154673 |
| TU229035 | lncRNA | upstream | 54019 | 3639863 ~ 3640681 (+) | True | G154667 |
| TU229029 | lncRNA | upstream | 58423 | 3634764 ~ 3636277 (+) | True | G154661 |
| TU229062 | lncRNA | downstream | 2087 | 3699109 ~ 3728810 (+) | True | G154690 |
| TU229074 | lncRNA | downstream | 100332 | 3797354 ~ 3797927 (+) | False | G154698 |
| TU229077 | lncRNA | downstream | 100332 | 3797354 ~ 3798914 (+) | False | G154698 |
| TU229071 | lncRNA | downstream | 100452 | 3797474 ~ 3797927 (+) | False | G154698 |
| TU229073 | lncRNA | downstream | 100452 | 3797474 ~ 3799284 (+) | True | G154698 |
| XM_043225373.1 | mRNA | upstream | 719 | 3691282 ~ 3693981 (+) | True | LOC122329176 |
| XM_043224434.1 | mRNA | upstream | 21108 | 3669197 ~ 3673592 (+) | False | LOC122328631 |
| XM_043224436.1 | mRNA | upstream | 21108 | 3669328 ~ 3673592 (+) | True | LOC122328631 |
| XM_043224433.1 | mRNA | upstream | 21108 | 3669328 ~ 3673592 (+) | False | LOC122328631 |
| XM_043224435.1 | mRNA | upstream | 21108 | 3669328 ~ 3673592 (+) | False | LOC122328631 |
| XM_043224008.1 | mRNA | downstream | 183 | 3697205 ~ 3698961 (+) | True | LOC122328357 |
| XM_043224236.1 | mRNA | downstream | 120210 | 3817232 ~ 3826580 (+) | True | tulp1a |
| XM_043225089.1 | mRNA | downstream | 131565 | 3828587 ~ 3854436 (+) | True | tead3a |
| XM_043225090.1 | mRNA | downstream | 131565 | 3828587 ~ 3854436 (+) | False | tead3a |
| XM_043225091.1 | mRNA | downstream | 131566 | 3828588 ~ 3854436 (+) | False | tead3a |
| XR_006247841.1 | other | upstream | 685090 | 2995169 ~ 3009610 (+) | False | rbm10 |
| XR_006247840.1 | other | upstream | 685222 | 2995169 ~ 3009478 (+) | False | rbm10 |
| TU228680 | other | upstream | 737975 | 2948916 ~ 2956725 (+) | False | G154424 |
| TU228663 | other | upstream | 737975 | 2955085 ~ 2956725 (+) | False | G154424 |
| TU228682 | other | upstream | 743611 | 2948916 ~ 2951089 (+) | True | G154424 |
| TU230095 | other | downstream | 2895584 | 6592606 ~ 6594735 (+) | False | si:ch211-220i18.4 |
| TU230359 | other | downstream | 3528972 | 7225994 ~ 7238919 (+) | True | G155561 |
| TU230347 | other | downstream | 3602257 | 7299279 ~ 7304358 (+) | False | tcea2 |
| TU230667 | other | downstream | 4634719 | 8331741 ~ 8333376 (+) | False | LOC122328506 |
| TU230751 | other | downstream | 4791064 | 8488086 ~ 8488641 (+) | True | G155799 |
