RNA id: TU230441


Basic Information

Item Value
RNA id TU230441
length 200
lncRNA type inter_gene
GC content 0.71
exon number 1
gene id G155619
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 7400990 ~ 7401189 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gctggttccgcccagccttcccgtaagcccgctggttccgcccagccttcccgtaagcccgctggttccgcccagccttcccgtaagcccgctggttccgcccagccgtcccgttagctcgctggttccgcccagccgccccgttagctcgctggttccgcccagccgtcccgttagctcgctggttccgcccagccgtc

Function

GO:

id name namespace
GO:0046982 protein heterodimerization activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05203 Viral carcinogenesis
ko05322 Systemic lupus erythematosus
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko05034 Alcoholism

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230289 lncRNA upstream 561829 6836963 ~ 6839161 (+) True G155509
TU230292 lncRNA upstream 562246 6836963 ~ 6838744 (+) False G155509
TU230227 lncRNA upstream 578940 6797111 ~ 6822050 (+) True G155457
XR_006247834.1 lncRNA upstream 672780 6725037 ~ 6728210 (+) True LOC122328804
TU230221 lncRNA upstream 677126 6720370 ~ 6723864 (+) True LOC122328803
XR_006247860.1 lncRNA downstream 465591 7866780 ~ 7868674 (+) True LOC122328944
XR_006247861.1 lncRNA downstream 465591 7866780 ~ 7868674 (+) False LOC122328944
TU230505 lncRNA downstream 519014 7920203 ~ 7921525 (+) True G155651
TU230496 lncRNA downstream 520833 7922022 ~ 7923577 (+) True G155645
TU230509 lncRNA downstream 528544 7929733 ~ 7932056 (+) True G155655
XM_043223976.1 mRNA upstream 95456 7298360 ~ 7305534 (+) True tcea2
XM_043224348.1 mRNA upstream 628004 6730816 ~ 6772986 (+) True soga1
XM_043224765.1 mRNA upstream 692323 6640878 ~ 6708667 (+) True lama5
XM_043224766.1 mRNA upstream 692323 6640878 ~ 6708667 (+) False lama5
XM_043224761.1 mRNA upstream 767643 6622854 ~ 6633347 (+) True mapre1b
XM_043224105.1 mRNA downstream 58309 7459498 ~ 7487536 (+) True oprl1
XM_043225219.1 mRNA downstream 283115 7684304 ~ 7765052 (+) False myt1b
XM_043225220.1 mRNA downstream 283115 7684304 ~ 7765052 (+) False myt1b
XM_043225222.1 mRNA downstream 283115 7684304 ~ 7765052 (+) False myt1b
XM_043225221.1 mRNA downstream 283115 7684304 ~ 7765052 (+) False myt1b
TU230347 other upstream 96632 7299279 ~ 7304358 (+) False tcea2
TU230359 other upstream 162071 7225994 ~ 7238919 (+) True G155561
TU230095 other upstream 806255 6592606 ~ 6594735 (+) False si:ch211-220i18.4
TU229052 other upstream 3704352 3694652 ~ 3696638 (+) False ube2t
TU229053 other upstream 3704352 3694652 ~ 3696638 (+) False ube2t
TU230667 other downstream 930552 8331741 ~ 8333376 (+) False LOC122328506
TU230751 other downstream 1086897 8488086 ~ 8488641 (+) True G155799
TU230843 other downstream 1625319 9026508 ~ 9033098 (+) True lzic
TU230931 other downstream 1719695 9120884 ~ 9122374 (+) False G155927
TU230934 other downstream 1719695 9120884 ~ 9122393 (+) True G155927

Expression Profile