RNA id: XM_043224714.1


Basic Information

Item Value
RNA id XM_043224714.1
length 5436
RNA type mRNA
GC content 0.46
exon number 5
gene id zbtb46
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 4730876 ~ 4800867 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

acacacacacacacacacacagagggggAGGTTGGTTCCTGATACCGAGACACGGAAAAGCAGGGGAGGGAGAATTACAGAAAAAGACGAGCgtggagagagggagacagCGAGCAGGGGAATTACACTGACCGACACACACGCGTCTCCCAGCTGACTGCTGACATTGTTGACGCGCTCACTCTCCCAAACCTGTCACGAGCGAAACACTGGAGCTCCGAAGCATCGACATCGCGCTCCCCCAGAACTCATGGGTTAACAGACTCTGTTCAGGAGAAGCAGCCACCCGTTAGTCCAATGAATAACCGGAAGGAAGACATGGAGATCACGTCGCACTACCGGCAGCTCCTGCGGGAGCTGAACGAGCAGCGGCAGCACGGCATCCTGTGCGACGTGTGTGTGATCGTGGAGGGCAAGATCTTCAAAGCGCACAAGAACGTGTTGCTGGGCAGCAGCCGCTACTTCAAGACACTTTACTGCCAGGTGAAGAAGGGCTCAGAGCAGCAGGCCACCATAACGCACCTGGACATCGTCACAGCTCAAGGCTTCAAGACCATCCTTGACTTCATGTACTCTGCCCACTTGGCGCTCACAAGCAAGAATGTGATCGAGGTGATGTCTGCCGCCAGCTACCTGCAGATGACCGACATAGTGCAAGCGTGTCACGGCTTCATCAAGGCGGCGCTAGACATTAGCATTCGCTCCGAGCTCGCTGACGAACTCACGGATATTGAGATGGGCAATGTGGTGAGCTCTATGGGAGGTGGGGCTGGGCCCGGTGTGGGCGGGGCTTCGGAAGCACTTGCCTCTATGATCTCGGCCCGCAGTTCCTCGCCGTGGTTGGCCAGACGCACCAGCCCGGCAAACTCATCTGGAGACTCAGCCATCGCTAGCTGCCACGAAGGTGGTAGCAACTACGGCAAGGAAGACCAGGAACCCAAAAGCCATGAGAGCCAGGAAGATGCTTGTTTGCAGCCCTTGTGGCCCGCTGACTACCGCTCTGTCCAGGTCAAAGAGGAGCAGGTCTCCCCCTCCAATCTGCAAGATGGGGCTGGCCGAGGGGCACAAGGCACGCCTGGAGAGCAAGGTGGACGAGGAGAGGGGGGCTGGCAACCCCCTGGCTCAGGCCGCAGGAAGAACCGTAAGAACAAGGACACGGTCAGGCACATAACCCAACAGAATGAAGGGGACAGTCGGACGGCGTCACCGCTGCCATCCATGCTCTCCAATCCTGGCTGGAGCTACAGCAACCAGGACATTCCAGGTGCAGAAGTGACAGAACCCAACATTTCCGACAGCCGCGGCGAGCGCATGGACCTCCTGGTAAAGCAGGAGGAGGCCGCGGCCGGGGACGGCGGGTTTCTGTCCGGGGAGCGAGACGAGGCCGTGGCCCAGGAGAGAGGGGGCTCGGTGGCCAACCTGCGAGCCGCCCTCATGAGCAAGAACAGCTTGTTGTCTCTGGGGGCAGAGATGCTCGGAGAGGAGAACCCGCTTCTGTTCGACTACCTACCCAAGAGTGGACACTCTCTCTCCCTTAATGACTTCACAGTGATCAGGAAGAAGTTTAAGTGCCCATACTGCAGTTTTTCTGCCATGCATCAGTGCATCCTGAAGAGGCACATGCGTTCACATACGGGCGAGAGGCCGTATCCTTGCGAGATCTGCGGGAAGAAGTTCACCCGGAGGGAGCACATGAAACGCCACACGCTGGTGCACAGCAAGGACAAGAAGTACGTGTGTAAAGTATGCAGCCGTGTCTTCATGTCGGCCGCCAGCGTGGGCATCAAGCACGGCTCTCGGCGTCACGGAGTCTGCGCAGACTGCTCTGGTCGAGGCATGGCTGCCCTGTTGGACCAGAATGGTGAGGACGGCTCGCCAGAGGAGGAACTCTTGTATCCCGGTGACCACCGTTTCCCCGATGACACCGCCGACGGCGACGGGGAAGAGGAGATGATGGTGGAAGCGGAGTTGATGGGAGAAGGTGAAGGAGAAGAGGAAAACGGGAAATGGCGGGCTGGCTCAGGGATGTCGCAGCGAGACGACAGAGCAATAGACGATGGCAAAGAGGAAAGCGACTCGGCTCTGGAAGGAGAAGCGAGGGCGGGAAGCGAGAAAGACTTCAGTTGGATCTCCTAGTCCAATGCCTGGATCCTACTCCAAGGTTGACCACCTGTTCCTATGAGGAGATATGCTTAAGGCGGGGCAATCGGATCTCAGCATGTGGAAGGAGCCGGAAACAGAGAGATCCTTGAGATGCCCACAGGGCTGCCAAAGGAGAGACAGTGGAGAGTCCTCTCGCCCCGACTCCATGTGCTTCTGACCCAGGCTTCAGTTTGTCTCCTTTCTTCCTTGAGGACCAAACGggtttctgtgtatgtgtttgctATTTCTTCAGACAAAAGAGATTGTCTTGTCTTGGGAGATTGTCCAAATCAGTACCACGCTTTGATGGGTCAGACAAAGAAAGTGTACGAAAGATGTGCTCTTGCCATATGGTCAGCCGCCACCAGGGGGCGCTGGCTTATCTATTGCGCAGCAGTTCACGTCAGAAGACTtgcaccagttttttttttttttttttggcacattgTTGTTTTCTGCGAAGAGAAACTGCAACAGACTTGCACTTTAAACGTTGACTAGATTCCTATCGATTCCCTGTTTCTgtggtttacatttttattccaaTTTACATAGATGAATATGGTGACCGCGCCTACCTTTAAGGATACACAGTATGTCCTTATGACTGttatatatgaacatttgtgCTAGGTTTGCTAATTATAATGTAtgccttttaatgttttatttcattgcaaTTTTCATTCCTGAACATTTATATTAAGGGGAAAAATCATGTATATAGATGCTTATAAGTGAGATGTTGATTTTGTGTTCTCGACAAAGAACGGTAAAGGGTGAACGGGATGGGTGAACACTATGCAGAAACGAATCTTTCTAGTTCTCAACAATCTTTATTCTCTCTATTATGGGAGAGAAAACTAGTCTTCAGCAATGGCAAAGCAGAGAGACTgggggagagagagatagtATACGAGTAGATTTATGGAAATATTACTTGTGTACCACTGTAACATTTCCTCATTATTTGCATTCCATAGTGGACACAGTCAGGGATGGGTATGGTTTTATACAGAGGGTTTCCAGTGTGGTGTGTttctattaaaatcaaaagaaaacaaaaaactaaacaaaacaaaacctgtatgcaaatgtgtgtattttgtaGGTTTGGTGTGTGGGGGGTGTTTAACTCAAACTAACGTCATTCAAAAGCCTTTACCGAAGCGGTTTCAGACTCTCTCCTCTCGTCCCTCTTTTTACGTTTGACGTATTTCGCGTTTTTTTCGCAGCCTTGCCATTGTACTGTACTGAGTCTGCCTCTGAAATCTTAAAGCCGTGTGATGTGACAGGGAGATATCATGCCTTCCcactaaatatttattgctCTAACTTCTGGAATATTCAGAAATATGCATCAATTTCTTAATCGGTGaaccacagtttttttttttttggttttttttgtcagtccATTTGAGATGacgaaacacaaaaacactttgtAATGAGACCATGGGGACTGATGTGTGCTGTAAAGTGAAATTGCTGTTCATTTACTGGGtttaaatggttatttatttagtttgcgTGTTGAGGGAGAGATTGTCTAGTCTTTCTACACATCCTTaccattctgtgtgtgtgtgtgtgtgtgtgtgcgcgcacgtgTGTACGAGTGTGTGAAGGACCGGGTTCATGAATGTCTTTTTACTCATTGTTTTAACAATCTGTGCCAGAATCTTTGACAATGGGAATAAAAACGCTTTATTATGCTTTACTTATGattaacaaattttaattattatggtTACTGTTGATATCGTTGTAattcttattgttattatgattattgttattgttattattattaagtgctGGAGGCTAAGCTTTATtatctgtttcatttttatatttcctttCTTGAAAAACAGTGTAAAACTTTCCAATCTTGCCTTTCTGTGGACAGCAAGCCATGTGGCTTTCAGAAGTAATTATATTGTGCCAGTTCCATGCATTTCTGAGTGATATTtgagaacttttttttccttattattatatttttcgaAGGATGAACCTTCTGAGAGCTTAACTTACTAAGTGTTGACAGAAAGGTATATACAGCACACGCTTCTATATTACTAACGTACACTAAGTAATGAATATTataccaaaaaataataatctggtATACTTTGTATACATTTAGTGCTTTTGTTTCGATTTGGTGTACAGGTGCAAAGCTTTGATCGAACAGTAAATTGCTTGgttgatttaatttgtttcCCTCTACTTTGAAAAAGCACAGATTATGGTGTTATGTTTTGAAGGGCTACTTGAAAGTACGTTTTAAGGAGGAATCACAGCTTTAATTCCGTTGCCCTTGGAAAAGTTTTAATGGATGTGCTCTACTGTATGTCATCACTCTGCATCTGAATTAAGAAGGCTGGCCACTGTCGTGTGGAATTATGGGAAATGTATGCTTTGCAATTAGAAATTGTACAAGCTTTTGACCTCAAATGTCACTGGCCCAAGTGCCAGGCACAATTGCTATCCAAATCCCTCCAAATGATTGgacatttagcttttttcctgtttgtttaatttattgtgtTCTTTAcctttaattgaaataaaatctgttggaatttaaaaacaaactggaCGGCATAATTTGAATGGAATCCATGCAAGTATATAGCCTTTTTTACACAGTAATACCAGTAAGTTGCTGTAGAATTACCAGAATGACTTTACcggtaaatgaaaaataattttccaGGTAATGCACATCATTCAcacatctattttaaaatacaggtAAATTCTGTGACACCATTAATCAGAAAGGCATTGAAGTGTCTGGATTAGCCCAGAGTAGCCCAGTCTAGCATTACTGCATTCTGAGTTTGTACGCGCTCATACCGGTACTCTTGTTCTGCGTCCACACTGAGCAGAATTCCAGCAATTTACTGATGTTACAACTTCTCTTACTGGTAAATTGCCAGAACAAATTTACCGGTACTTTTTAAATAGGCCTGTTCACGCACGATAGCGTTTACCGGTAATTTACCAGTAAAGCCTGTATTTGTGAAAGGGGTTAATATGAGATTTCATGATTggtctatttttaaatacacttgcTGATGCTTCTCAGTCATTTCAATCAGGTAATTTGTACAGATCAATATTAAAGCATATGTGCCTCTATATACTTGCTACAAGTGTACTATAAATGACCCAGTGTGTGGTTAATTTGTGGTTGTGTTTGTAAGTGCATGCACATGTAGGTTTTGCCCATGCATCAGAGATGTAAATTCTGCAATATAGcatttcttcctttttattcca

Function

GO: NA

KEGG:

id description
K10517 ZBTB46, BTBD4; zinc finger and BTB domain-containing protein 46

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU229422 lncRNA upstream 177712 4551033 ~ 4553168 (+) True G154934
TU229284 lncRNA upstream 425448 4249319 ~ 4305432 (+) True G154837
TU229253 lncRNA upstream 569260 4111382 ~ 4161620 (+) False G154815
TU229249 lncRNA upstream 569260 4136398 ~ 4161620 (+) True G154815
TU229188 lncRNA upstream 681883 4048746 ~ 4048997 (+) True G154759
TU229478 lncRNA downstream 16498 4817365 ~ 4835482 (+) True LOC122328459
TU229494 lncRNA downstream 35126 4835993 ~ 4838432 (+) True G154989
TU229506 lncRNA downstream 63458 4864325 ~ 4915121 (+) True G154997
TU229538 lncRNA downstream 175802 4976669 ~ 4977310 (+) True G155024
TU229552 lncRNA downstream 295661 5096528 ~ 5097144 (+) True G155032
XM_043224336.1 mRNA upstream 20543 4688893 ~ 4710337 (+) False uckl1b
XM_043225496.1 mRNA downstream 2581 4803448 ~ 4807997 (+) True lmod3
XM_043224157.1 mRNA downstream 33454 4834321 ~ 4835484 (+) False LOC122328459
XM_043224428.1 mRNA downstream 84329 4885196 ~ 4909027 (+) False cacnb3a
XM_043224427.1 mRNA downstream 84330 4885197 ~ 4913873 (+) True cacnb3a
XM_043224430.1 mRNA downstream 119281 4920148 ~ 4927439 (+) True birc7
TU229052 other upstream 1034242 3694652 ~ 3696638 (+) False ube2t
TU229053 other upstream 1034242 3694652 ~ 3696638 (+) False ube2t
XR_006247841.1 other upstream 1721270 2995169 ~ 3009610 (+) False rbm10
XR_006247840.1 other upstream 1721402 2995169 ~ 3009478 (+) False rbm10
TU228663 other upstream 1774155 2955085 ~ 2956725 (+) False G154424
TU230095 other downstream 1791739 6592606 ~ 6594735 (+) False si:ch211-220i18.4
TU230359 other downstream 2425127 7225994 ~ 7238919 (+) True G155561
TU230347 other downstream 2498412 7299279 ~ 7304358 (+) False tcea2
TU230667 other downstream 3530874 8331741 ~ 8333376 (+) False LOC122328506
TU230751 other downstream 3687219 8488086 ~ 8488641 (+) True G155799

Expression Profile