RNA id: TU282476


Basic Information

Item Value
RNA id TU282476
length 714
lncRNA type read_through
GC content 0.45
exon number 2
gene id G190366
representative False

Chromosome Information

Item Value
chromosome id NW_025048446.1
NCBI id JAEQBD010000791.1
chromosome length 1202875
location 974261 ~ 1104473 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tatatatatatacacacacacacacacacacacacacacacacacactataaaaccatacaaaatgtctaaaatgtgaGAAAGATCTTTTTTGGCATCTGTTCCATGTTCAGTGTTCTCTTCCCGGATTTCTTACTCAGGAAAACATGAATTCTTGTCTTCTAAAGGCTTAGAATAGTTGACTTTCTTTCCCATGCCCAAAGAATCGCTTCCAACAGCAGAAGTACGGCTAGTCCGTAAATGTCAACCGGTGGTTTTGAGGTTGTCATGGAAACAGCCAGTTCCCCTTTGGAGAAGTTCGTCTTTGTGCTCTGATACAATAAAGTCCCTCACGGTTCATTAGATGTCAGGCAATCTGTGCACTTGGCATATATGAGCGTGCACAGGACAAAACTGAGTATAAACACGGCCTGTAGAGAagaataaaatctaatattcagtgttagttcatgcattccctcgctctctctgtctgtgtgtgtgaagtgttgTCCTGTGGAAACGTGCGCAGTCAGTGCGAGTGTACGAGACGTGCTGCAGCATCCAGTGCTCtcacaggtcaaaggtcaggctCATACAGGCCTGTTGTAGGTGTAATGGTTTCTGTCCGTGTCTGCGATCTGAAGGCTGGGCTTGCGTTCGCTGTCTTCGTTTTCAGCATTTTCAACATCCGGGCATCGAGGGGGGCGCTCTTTGAAGAAGTCAGAGATGTACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006249000.1 lncRNA upstream 28736 937018 ~ 945525 (+) True LOC122335692
TU282468 lncRNA upstream 60194 908151 ~ 914067 (+) True rab31
TU282452 lncRNA upstream 109298 862415 ~ 864963 (+) True G190353
TU282449 lncRNA upstream 114727 859310 ~ 859534 (+) True G190350
XR_006249003.1 lncRNA upstream 121509 845940 ~ 852752 (+) True LOC122335698
TU282600 lncRNA downstream 127872 1180821 ~ 1181264 (+) True G190443
TU282602 lncRNA downstream 128513 1181462 ~ 1181721 (+) True G190445
TU282604 lncRNA downstream 129297 1182246 ~ 1182740 (+) True G190447
TU282606 lncRNA downstream 130825 1183774 ~ 1184048 (+) True G190449
XM_043233505.1 mRNA upstream 46072 920957 ~ 928189 (+) True LOC122335651
XM_043233515.1 mRNA upstream 60847 906262 ~ 913414 (+) False rab31
XM_043233519.1 mRNA upstream 67213 894128 ~ 907048 (+) True ralbp1
XM_043233540.1 mRNA upstream 139831 817333 ~ 834430 (+) False sirt6
XM_043233544.1 mRNA upstream 306070 662618 ~ 668191 (+) True hsd11b1lb
XM_043233500.1 mRNA downstream 71135 1124084 ~ 1175611 (+) True scn12aa
XR_006248997.1 other upstream 137583 817333 ~ 836678 (+) True sirt6
XR_006248998.1 other upstream 137583 817333 ~ 836678 (+) False sirt6
TU282180 other upstream 627107 338941 ~ 347154 (+) True G190175

Expression Profile