RNA id: XR_006248997.1


Basic Information

Item Value
RNA id XR_006248997.1
length 4269
RNA type transcript
GC content 0.44
exon number 9
gene id sirt6
representative True

Chromosome Information

Item Value
chromosome id NW_025048446.1
NCBI id JAEQBD010000791.1
chromosome length 1202875
location 817333 ~ 836678 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CACGTAGTACGCACGTTCTTGACGTCACACGCAGGACTAGTAACACACAAAACCGACTGAACGGAAAATCAGAAACTCTTGCTTTGGCTAACTTGAATTTACTGTTTAGCCAAAAGAAAAGTGAGTCATGTCGGTGAATTACGCCGCTGGACTCTCTCCATATGCGGATAAAGGCATCTGCGGCCTCCCGGAGGAGTTTGACGGCCCAGAGGAGCTGAAGACTAAAGTGGAGACCCTGGCTCAGTGGATCAAGGAGTCACATTACATGGTGGTGCATTCAGGAGCTGGAATCAGCACGTCTTCAGGGATCCCAGACTTCAGAGGTCCTAATGGAGTGTGGACGATGGAGGAGAGAGGCGAGTCGCCTCACTTTAACACCACGTTTGAGGACGCCCGTCCCAGTCTGACTCACATGTCCCTGCTGCAGCTGCAGAAGACGGGACACCTCAAATACCTCGTCAGCCAGAACGTAGACGGCCTCCACCTGCGCTCCGGCTTCCCCAGGGATCGATTGTCGGAGCTACATGGGAACATGTTCGTTGAAGAATGTGAGAAGTGCGGCAAGCAATATGTTCGGGACACTGTAATTGGAGTGATGGGTCTGAAGCCGACCGGACGCTACTGCGATGTCACACGCTCAAGAGGACTCCGATCTTGCAGAGGAAAGCTGATCAGCACTATATTGGACTGGGAGGACTCACTGCCTGACAGAGACCTGAATAGAGCTGATGAAGCATGTCGGCGAGCTGACCTGGCCTTGACGCTGGGAACATCTCTTCAAATTAAACCAAGCGGAGATCTTCCTCTTCTGACCAAACGCACAGGAGGGAAGCTGGTTATAGTCAACCTTCAGCCCACCAAACACGACAAACACGCTCACCTGCGTATCCACGGCTATGTAGACGAGGTCATGGGTCAGCTGATGAAGCTGCTGGGATTGGAGGTTCCAGAGTGGGCGGGGCCAACGCTGTGTGAAAGCTCGGGTGGAGACCAGGACATCCTCCCATTCGGAGCTTGGAAAAAGGAAGTGAAGATCGAGCTGAAGATAGAGGAAAATAAACCCGCCGTCCCAAAAAAACGAaagaagaaagagcaggattGCGAGACAAACTGCAAGAAAGATGTTAAAGTTGAAGAAGAGTCAAAAGAAGAGGGAAAGGAGGCAGCGCTTAGTGACTCTGAACCGATCAAAATGCGGAAGTCGCATCCTTTAAACGGCTCCTCGATAAATCCTACAAGTTCTTCTGCCGTGAAGGAAACGGACGCTGAACCACAGACAGACACTGAACAGCCCTCTTCCTAGAGCCCTGTCACAATCAAACAAATCTCAGGAAGCGTGGTCACTGTATGCCCTGTGtttacatcatcatcatcatcatcatcatcaaaaccTGGACTCAGGCCTGTTAGATGAAGTAAGATGAAACGATGTCATTGAGTCGTGAGTGTGTACCATTACAGCTGGTCAGTGGATAAATTAGACCGATATTATTTCTGTTCGTCAGCCGATCTGCGCGGTTTTTCTGGCTGGAAGTTTTGGTGAATCACGGTTTTGCACTGTCAAATGAACACATGCTCTTTTCTACCCTCGAATAAATCAGGTTTGCAAAAACAAGGTTCACTGCGCAAAATGTTTCTGTCATATTTCACccttaaatcatttttacaataattgaaaaaatatttttttataatagacagtacaacaaatactacgattttttttttttatacgggAAATTCGTTTAATCGTCATGCAACATTCCCACTTGAAAATGGTCTTAAAAATACACTAGTTAtattttttggggtgaaatacGACCCAAGGCGAGTTTAGTGAGCTTCGaaatttaaggaaaaaaatgagCTTAAGTTGTTCGTACTAATCGTGTAACGTGATGCTTTATTAATGTCCACTTCTCCAGCCGCTAATTTCCCTTCAGTGACGAGacgtttattttttgtttttattttccaaaatcgGCGCCATTGTGTAACtttgtttttctactttttcataaaaaaaaacaaccattgTATATAAACAAGATGCTGAAACTgtaaaactgactttttttgtgtgtgtaacctGTCTTATATCCTTGTATGatgcctacatagacagcatacTCTTCTCAAGAAAGCAGCTATCTGCACACGGCCTTTTCTGTCATCTCACTGAACGGAGTAATGCAACGAATTCTCCAGACGCGTCTTTGAAAGTGCCGCATTAAACCGCCGAGGAGGGTGTTGAAGACGGACGGTGACCGCCGCGACTGATGAGCGGGGACAGTACAAGTCAGGCGTACATCAGCTACCGCGGAGACTATTAACACGTCCCCGAGGTGCCATCAAGACTGTTTTGACAGGCCTCCAGTGATCCAGCCACTTCTGAGAGAAAAGCTGAAAGCTCTCTCTAACCCCGTCGTGTCTTTGGCTGTTCGTGCAGAAATGTGCCGAATAAAACAACAGAGGAAAAGCCGGATAAACACGGCGCTCGTGTTCTGATCGCTCCGGGGACCAGAGCTGTTCCGATGAAGTCAGCGGACGCTTCTCTTATGatcaaagatgaatgaaagctGGACTGAGAACTCCTAGAACAAAGTCTGAGCTGGCCTGGATTCCTTCGCCGCATGAACCCTTAAGTCTGCAGAGATTCTTTTGACAGCACAGAGGCTTTAGTCAACAATAGCTCTGACAAAATCCCTACAGAGACCTTGAAAAGGGGCATGTTGTGTCCTAGAAGACGCCTAATTTATCCAGTACACAAATCGACTAAACGAGCAGACAGCGCAACAGCGGCGTCATCAAAATCGTTGTCATTGTCAGCAGATCGATATTGTGTACGCCGGCCGGTTTCTTCAAGAAGCAAATTATTATACTTCATACTGAGTTGTTATATTTCGTACTGAAGCACAAATTTGTTTTTCGGAAGTGGACGGCGGAGTGGTTCAATGCTTGTGGCTCAGGGAAGGCTGCTTGAGCTGGATGATATgaaatgcactgcaaaaacTTTCTTTCACAGTGTTTTGTTCGTAGCTCAACATTGGTGAAGGAAATGGTGACCCAAATGAAACTCGTAGAAGAATTTGTTTCTTAATCAGAACACATTTGGAGAATTTTTAGCAATaagtgcagtgaatgggtgccgtcagaataagtgtccaaacagctgatgaaacaTCAAGTAATCCACAACACTCCAGTttatcaattaacatcttgcaAAGCCAAAAGATTAAATAGAGTAAATATAAGAAACGGATTTATCATTACAATAGAGTCCTCAGTCCATAATGTTGCACTGTCCAGAGAAAAAGCAAGGTATATGCATAAAATCAAGTCACGGTTTACTAGCCAAAATCATTCTGAACAAATATATGGGTGTATTTTGATGTGAAAGACAACAGAGGATGGACTTTTTCCACTTGAGGAAGTTTtatagattaaatttttttaaccaGCTTTTCGCTTGACCACGCtccaatttaaataaaaataaatgccattCTTATTGCAAGAGGCAGCATCTTGTACAGTGTGCCAGACATTGGCACCGTAGAAACCGCTTTAACGGAAGGCAACTGTTCTCTGTCAGCAGACACCTGAATTGCTATGTTGCAGCTCAGACCGCCTGCTGTTGAACAGTCAGTCAGACAGCTCGGATCATTTTCCAATCATTCCTGGCCCCCACATCTAGCACGTCTCTATGTGGACATCTCGGCTCCCCTCCGGGCTGTTCGAGCGCCCTGCAGCCTCTGCAGCATACTAACACCTTCCTGCTTTCTTACCCAACAACCTCGTCAAGAGCTCTCATGGCCATCAGCAGAACTCTTCGTGACTTCTCAAATCTCTTCCCACAAAGAGATGAAGTCTCTGTTCTTCTGAAATCATACTTCAATTGGTTGCACCAGTTGATTTTTAACACTTTGTGACTTTgcttgcttttattgttttatgttgttttcagTTGTATTGGTATGCAAATGCTTAAAgcgtattaaaaatgtaaaaatctccATATTATAACCTAAATTAACAGCTGATCTCGCATGTTATGACTTTTAACTAATTCAGTACATATTAGATACATAAATTTGAGACTTCTAAATTATCAACGGGATGTATAAGGCCTGCTTTGCTGGGAAAAAAACGGTAATACATAATCTTGTATGCAGTCTGTTTAGCAGGTATAAAGATCGCACTgatttcatttacattacaaactATTACCtattataactataactattaaattgcatattgtaa

Function

GO:

id name namespace
GO:0070403 NAD+ binding molecular_function

KEGG:

id description
K11416 SIRT6, SIR2L6; NAD+-dependent protein deacetylase sirtuin 6

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU282405 lncRNA upstream 107869 703536 ~ 709464 (+) True G190314
TU282400 lncRNA upstream 135906 676623 ~ 681427 (+) True G190311
TU282384 lncRNA upstream 168840 648219 ~ 648493 (+) True G190302
TU282382 lncRNA upstream 171070 645855 ~ 646263 (+) True G190300
TU282380 lncRNA upstream 171947 645159 ~ 645386 (+) True G190298
XR_006249003.1 lncRNA downstream 9262 845940 ~ 852752 (+) True LOC122335698
TU282449 lncRNA downstream 22632 859310 ~ 859534 (+) True G190350
TU282452 lncRNA downstream 25737 862415 ~ 864963 (+) True G190353
TU282468 lncRNA downstream 71473 908151 ~ 914067 (+) True rab31
XR_006249000.1 lncRNA downstream 100340 937018 ~ 945525 (+) True LOC122335692
XM_043233544.1 mRNA upstream 149142 662618 ~ 668191 (+) True hsd11b1lb
XM_043233528.1 mRNA upstream 155429 652741 ~ 661904 (+) True zmp:0000000521
XM_043233546.1 mRNA upstream 205224 554084 ~ 612109 (+) False LOC122335697
XM_043233547.1 mRNA upstream 205224 555603 ~ 612109 (+) False LOC122335697
XM_043233545.1 mRNA upstream 205224 555605 ~ 612109 (+) True LOC122335697
XM_043233519.1 mRNA downstream 57450 894128 ~ 907048 (+) True ralbp1
XM_043233515.1 mRNA downstream 69584 906262 ~ 913414 (+) False rab31
XM_043233505.1 mRNA downstream 84279 920957 ~ 928189 (+) True LOC122335651
XM_043233517.1 mRNA downstream 137895 974573 ~ 1007421 (+) True gna11b
XM_043233518.1 mRNA downstream 144141 980819 ~ 1007421 (+) False gna11b
TU282180 other upstream 470179 338941 ~ 347154 (+) True G190175
TU282478 other downstream 171498 1008176 ~ 1019425 (+) False chico
TU282479 other downstream 183006 1019684 ~ 1022876 (+) False chico
TU282480 other downstream 183006 1019684 ~ 1022876 (+) False chico

Expression Profile