RNA id: TU61756



Basic Information


Item Value
RNA id TU61756
length 970
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G41757
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 1588063 ~ 1640067 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


agattttcaaaactttattgGATTTCTCAATTGGTGTAATATTCATCTCAAGGGATGACAGAcagtaaaaaacataaaaaaaaaaaaataacgagTGCTCGTTGAAGCCCTGAAGGGGTAAATATGAAGCATGGCGTCTAAAACAGCACTTTAGATTAAGAGACACGTTTCTGCTGCTGTGATAAGGAAAAcactatttaaaagaaaattcagtCAAATCTAAATCGTCTTAATGAAAACTCTCCAGATCTACATGCCTCTGCAGCCACTTAAAGCAACTTTACAGCAACGtataaaaagaaacaaggaTAACACACACCTATCGTCTTCCGTCACATCCGTCCCAAGTGACAAAAGCAGTGGAATAATCTAGCAGgttaatgggaaaaaaaatagcttgacCAATGCTTATTACTAAAAATGACACCGACACCATCCAAACCTTCATAAGTTCACTCACAGGCCCCAAACGGTTGTATGATAACACAGTACTGCTGTCAGAACCGATAATCAGCCTTTTGCTCGCGCTCAAAACACAGTCGTGTAGATTCTGCAGATCGTCGGCAATTAAAGACGTCGATGGTTACACGAGCGCTTCCAGCGAACTGCTTGAgctgaatagattttaaaaaacgaTGTTTATAGAGCCCGAGGATGAGATCTTAAATCATACTAGCAATCGTAAGTGTGTGTGTCGGCAAATAAATAACTTCCAGGCACCCAGTATGTTTgttcaaaaggaaaaaatgtgacGTTAAGGTTTTATGCAGCTTTTGACACAAGTAGTACTCGGAGAACGCATTTTTTCCGGGTTTCTCAATTTTCGGGGGAAATCTACTTTACAAAAATAAGGCCACGGTTCTTAAGAGCCGTTTTCACTTTTTGCCTGTTTGGAAGCCGGCTCTTCATTATTTCGACCGTTAGACTCCAGAGGTCTCTTCTTTGGAGTGTCTTGTTCTCGATATACCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU61753 lncRNA downstream 28039 1559719 ~ 1560024 (-) True G41754
TU61566 lncRNA downstream 149934 1434973 ~ 1438129 (-) True G41617
TU61562 lncRNA downstream 156129 1425568 ~ 1431934 (-) True G41615
TU61521 lncRNA downstream 482530 1104999 ~ 1105533 (-) True G41587
TU61517 lncRNA downstream 503886 1083798 ~ 1084177 (-) True G41583
TU61776 lncRNA upstream 26041 1666108 ~ 1716341 (-) False LOC122347396
TU61785 lncRNA upstream 47053 1687120 ~ 1693349 (-) True G41774
TU61802 lncRNA upstream 71043 1711110 ~ 1711540 (-) True G41784
XR_006251218.1 lncRNA upstream 75063 1715130 ~ 1716124 (-) False LOC122347396
XR_006251217.1 lncRNA upstream 75063 1715130 ~ 1716123 (-) False LOC122347396
XM_043241270.1 mRNA downstream 21598 1560827 ~ 1566465 (-) True dmbx1b
XM_043241837.1 mRNA downstream 44036 1542306 ~ 1544027 (-) True LOC122346936
XM_043241835.1 mRNA downstream 45897 1536450 ~ 1542166 (-) False lrrc41
XM_043241834.1 mRNA downstream 45897 1536450 ~ 1542166 (-) True lrrc41
XM_043241312.1 mRNA downstream 641750 940290 ~ 946313 (-) True hyi
XM_043242623.1 mRNA upstream 76662 1716729 ~ 1731431 (-) False tlk1b
XM_043242622.1 mRNA upstream 76662 1716729 ~ 1731431 (-) True tlk1b
XM_043242624.1 mRNA upstream 76662 1716729 ~ 1731240 (-) False tlk1b
XM_043242625.1 mRNA upstream 115234 1755301 ~ 1764530 (-) True slc25a12
XM_043241061.1 mRNA upstream 125089 1765156 ~ 1768100 (-) True unc50
TU61311 other downstream 1174510 225710 ~ 413553 (-) True G41443
TU61336 other downstream 1412868 173968 ~ 175195 (-) False LOC122346743
TU61334 other downstream 1424006 163323 ~ 164057 (-) False LOC122346743
TU61792 other upstream 62766 1702833 ~ 1707408 (-) True G41781
TU62012 other upstream 1200595 2840662 ~ 2843258 (-) True G41955
XR_006251230.1 other upstream 1452473 3092540 ~ 3107897 (-) False cep170ab
XR_006251231.1 other upstream 1454723 3094790 ~ 3107897 (-) False cep170ab
XR_006251245.1 other upstream 2004199 3644266 ~ 3644404 (-) True LOC122347626

Expression Profile