RNA id: TU92153



Basic Information


Item Value
RNA id TU92153
length 616
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G62231
representative False

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9032519 ~ 9037868 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTAGACAATACAAAACGCTGGAAatcaaaaatgcaacaaaagcaaaagaacaGACCCAAGCGACTACAAAACCCTTTCAgctcattccaaacctttcaCCTCTATAAACACGTGAAATCTCTTACTACAAGAGGAAAAGTGTGTGTAAAAGCCTCTGGCCaaggttaaaatgtaaaagctcTCACGAGAGCAGTTCTGAAGCTTTGGAGGCATTTCCTGTACTTGTGTGTAGTTCGTCTACATTACAGAACGCTCACCTGATAGATAACTTTCCCGCTCTGAATGACATAGAGGCGCTCAGGCAGGGCTCCGTATTTGCTGGCAGTGATGTTGCTCATCTCATCCACTACCACGGGGCAAAGGGGGTCTTCTTTGGCCAGGGTCCGGGCCGCAGCCAGTCTCTCCTCCAAGTTTTTGTGCACGCTGATGTCGACGTTGTTTGCAAAAGACCAAGCATCTGCAAAGAACAGAAGAATTTTACAAGTTATTTAACATATAACTCTAGCTTCCAAAACTCAGAGACGGTGGATGTTTCCCTGTGAAGAAGACTGCATCAGTAACAGTGTTGGGTGTAATGCATTACGTACCGAGTACTTACGGTAATTTAAATAAGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92133 lncRNA upstream 59493 8974398 ~ 8974669 (+) True G62216
TU92132 lncRNA upstream 59817 8974097 ~ 8974345 (+) True G62215
TU91974 lncRNA upstream 381595 8587680 ~ 8652567 (+) True G62106
TU91869 lncRNA upstream 555831 8477226 ~ 8478331 (+) False smim15
TU91872 lncRNA upstream 563326 8469057 ~ 8470836 (+) True G62045
TU92296 lncRNA downstream 152187 9190055 ~ 9191320 (+) True G62314
TU92375 lncRNA downstream 225059 9262927 ~ 9264290 (+) True G62381
TU92397 lncRNA downstream 288211 9326079 ~ 9327293 (+) True G62399
TU92399 lncRNA downstream 315726 9353594 ~ 9359274 (+) False G62401
TU92400 lncRNA downstream 315726 9353594 ~ 9356740 (+) True G62401
XM_043247743.1 mRNA upstream 5079 9018753 ~ 9029083 (+) False ssbp3b
XM_043247741.1 mRNA upstream 5079 9018754 ~ 9029083 (+) False ssbp3b
XM_043247742.1 mRNA upstream 5079 9018754 ~ 9029083 (+) False ssbp3b
XM_043247740.1 mRNA upstream 5079 9018755 ~ 9029083 (+) True ssbp3b
XM_043247009.1 mRNA upstream 24655 9006129 ~ 9009507 (+) True lrriq3
XM_043246228.1 mRNA downstream 1731 9039599 ~ 9109833 (+) True LOC122350046
XM_043246229.1 mRNA downstream 1731 9039599 ~ 9109833 (+) False LOC122350046
XM_043246004.1 mRNA downstream 201263 9239131 ~ 9250522 (+) False alkal1
XM_043246003.1 mRNA downstream 202344 9240212 ~ 9250522 (+) True alkal1
XM_043246006.1 mRNA downstream 202345 9240213 ~ 9250522 (+) False alkal1
TU91548 other upstream 1505094 7524635 ~ 7529068 (+) False soat1
TU91547 other upstream 1510266 7306119 ~ 7523896 (+) True soat1
TU91367 other upstream 2184451 6848481 ~ 6849711 (+) True G61713
TU91369 other upstream 2184451 6848481 ~ 6849711 (+) False G61713
TU91312 other upstream 2267619 6756105 ~ 6766543 (+) False G61678
TU92500 other downstream 666613 9704481 ~ 9705639 (+) True G62483
TU92869 other downstream 1311091 10348959 ~ 10353113 (+) False col2a1a
TU92796 other downstream 1393934 10431802 ~ 10440496 (+) False G62692
TU92799 other downstream 1431006 10468874 ~ 10478799 (+) True G62692
XR_006251600.1 other downstream 2154856 11192724 ~ 11197803 (+) False LOC122350428

Expression Profile