Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043247377.1 |
| length | 1096 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 4 |
| gene id | cdo1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056706.1 |
| NCBI id | CM032075.1 |
| chromosome length | 24299999 |
| location | 1170649 ~ 1178671 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0042412 | taurine biosynthetic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0046439 | L-cysteine metabolic process | biological_process |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0017172 | cysteine dioxygenase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU88551 | lncRNA | upstream | 5873 | 1162420 ~ 1164776 (+) | True | G59877 |
| TU88549 | lncRNA | upstream | 9489 | 1156922 ~ 1161160 (+) | True | G59876 |
| TU88548 | lncRNA | upstream | 9720 | 1159946 ~ 1160929 (+) | False | G59876 |
| TU88509 | lncRNA | upstream | 147735 | 1021192 ~ 1022914 (+) | True | G59845 |
| TU88461 | lncRNA | upstream | 193943 | 973486 ~ 976706 (+) | True | G59814 |
| TU88575 | lncRNA | downstream | 32144 | 1210815 ~ 1213009 (+) | False | pggt1b |
| TU88590 | lncRNA | downstream | 89513 | 1268184 ~ 1268392 (+) | True | G59898 |
| TU88591 | lncRNA | downstream | 89767 | 1268438 ~ 1268674 (+) | True | G59899 |
| TU88634 | lncRNA | downstream | 213472 | 1392143 ~ 1393428 (+) | True | G59914 |
| TU88600 | lncRNA | downstream | 217376 | 1396047 ~ 1489391 (+) | False | G59903 |
| XM_043246766.1 | mRNA | upstream | 41147 | 1069841 ~ 1129502 (+) | True | sema6a |
| XM_043247205.1 | mRNA | upstream | 154084 | 1005559 ~ 1016565 (+) | True | hsd17b4 |
| XM_043248001.1 | mRNA | upstream | 247441 | 918543 ~ 923208 (+) | True | LOC122351116 |
| XM_043247893.1 | mRNA | upstream | 293702 | 856045 ~ 876947 (+) | False | LOC122351049 |
| XM_043247891.1 | mRNA | upstream | 293704 | 853071 ~ 876945 (+) | True | LOC122351049 |
| XM_043247331.1 | mRNA | downstream | 7098 | 1185769 ~ 1187485 (+) | True | tmed7 |
| XM_043247265.1 | mRNA | downstream | 9677 | 1188348 ~ 1199937 (+) | True | LOC122350615 |
| XM_043246262.1 | mRNA | downstream | 25570 | 1204241 ~ 1209643 (+) | True | LOC122350068 |
| XM_043246263.1 | mRNA | downstream | 25887 | 1204558 ~ 1209643 (+) | False | LOC122350068 |
| XM_043246264.1 | mRNA | downstream | 25889 | 1204560 ~ 1209450 (+) | False | LOC122350068 |
| XR_006251599.1 | other | upstream | 318645 | 842077 ~ 852004 (+) | True | znf608 |
| TU88420 | other | upstream | 365810 | 803653 ~ 804839 (+) | True | G59807 |
| TU88285 | other | upstream | 630583 | 537794 ~ 540066 (+) | False | cdc14b |
| TU89150 | other | downstream | 736789 | 1915460 ~ 1918371 (+) | True | G60259 |
| TU89212 | other | downstream | 836209 | 2014880 ~ 2017520 (+) | False | polb |
| TU89216 | other | downstream | 852207 | 2030878 ~ 2033063 (+) | False | LOC122350053 |
| TU89217 | other | downstream | 855221 | 2033892 ~ 2035980 (+) | True | LOC122350053 |
| TU89218 | other | downstream | 859081 | 2037752 ~ 2039836 (+) | False | LOC122350758 |
