Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022684499.1 |
| length | 1752 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 2 |
| gene id | hand2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035921.1 |
| NCBI id | CM008324.1 |
| chromosome length | 46505145 |
| location | 465499 ~ 468662 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0003342 | proepicardium development | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0003142 | cardiogenic plate morphogenesis | biological_process |
| GO:0003144 | embryonic heart tube formation | biological_process |
| GO:0071908 | determination of intestine left/right asymmetry | biological_process |
| GO:0035118 | embryonic pectoral fin morphogenesis | biological_process |
| GO:0030859 | polarized epithelial cell differentiation | biological_process |
| GO:0010002 | cardioblast differentiation | biological_process |
| GO:0030878 | thyroid gland development | biological_process |
| GO:0048703 | embryonic viscerocranium morphogenesis | biological_process |
| GO:0060047 | heart contraction | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046983 | protein dimerization activity | molecular_function |
| id | description |
|---|---|
| K18486 | HAND2; heart-and neural crest derivatives-expressed protein 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU289068 | lncRNA | upstream | 110035 | 355052 ~ 355464 (+) | True | G212921 |
| TU289067 | lncRNA | upstream | 117666 | 347539 ~ 347833 (+) | True | G212920 |
| TU289066 | lncRNA | upstream | 123990 | 341307 ~ 341509 (+) | True | G212919 |
| TU289005 | lncRNA | upstream | 207907 | 254024 ~ 257592 (+) | False | G212871 |
| TU289006 | lncRNA | upstream | 207907 | 254024 ~ 257592 (+) | True | G212871 |
| XR_002651881.1 | lncRNA | downstream | 7762 | 476424 ~ 488543 (+) | True | LOC111195947 |
| TU289099 | lncRNA | downstream | 74818 | 543480 ~ 544402 (+) | True | G212940 |
| TU289100 | lncRNA | downstream | 74818 | 543480 ~ 543985 (+) | False | G212940 |
| TU289105 | lncRNA | downstream | 111186 | 579848 ~ 581109 (+) | True | G212945 |
| XR_002651878.1 | lncRNA | downstream | 118953 | 587615 ~ 592952 (+) | True | LOC111195934 |
| XM_022684403.1 | mRNA | upstream | 215768 | 229235 ~ 249731 (+) | True | fbxo8 |
| XM_022684547.1 | mRNA | upstream | 296439 | 135827 ~ 169060 (+) | True | hpgd |
| XM_022684401.1 | mRNA | upstream | 339647 | 27843 ~ 125852 (+) | True | glra3 |
| XM_022684684.1 | mRNA | downstream | 37439 | 506101 ~ 511559 (+) | True | scrg1 |
| XM_022684424.1 | mRNA | downstream | 50525 | 519187 ~ 528063 (+) | True | hmgb2 |
| XM_022684405.1 | mRNA | downstream | 872089 | 1340751 ~ 1351396 (+) | True | LOC103042715 |
| XM_007232149.3 | mRNA | downstream | 897139 | 1365801 ~ 1374851 (+) | True | tnip2 |
| XM_007232150.3 | mRNA | downstream | 897139 | 1365801 ~ 1374488 (+) | False | tnip2 |
| TU289085 | other | downstream | 37763 | 506425 ~ 511517 (+) | False | scrg1 |
| TU289262 | other | downstream | 872171 | 1340833 ~ 1349465 (+) | False | LOC103042715 |
| XR_002651900.1 | other | downstream | 2825266 | 3293928 ~ 3358194 (+) | True | LOC103044168 |
| XR_002651901.1 | other | downstream | 2825266 | 3293928 ~ 3358194 (+) | False | LOC103044168 |
| XR_002651902.1 | other | downstream | 2825266 | 3293928 ~ 3358194 (+) | False | LOC103044168 |
