Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU51387 |
| length | 773 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G38099 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 21321839 ~ 21322611 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51397 | lncRNA | upstream | 4494 | 21317103 ~ 21317345 (+) | True | G38106 |
| TU51389 | lncRNA | upstream | 49267 | 21272132 ~ 21272572 (+) | True | G38101 |
| TU51380 | lncRNA | upstream | 181938 | 21131630 ~ 21139901 (+) | True | G38093 |
| TU51377 | lncRNA | upstream | 193098 | 21118229 ~ 21128741 (+) | False | lgi1 |
| TU51366 | lncRNA | upstream | 273735 | 21044512 ~ 21048104 (+) | False | G38081 |
| TU51413 | lncRNA | downstream | 36528 | 21359139 ~ 21359560 (+) | True | G38117 |
| TU51418 | lncRNA | downstream | 41750 | 21364361 ~ 21369269 (+) | True | G38120 |
| TU51451 | lncRNA | downstream | 252251 | 21574862 ~ 21620560 (+) | True | G38152 |
| TU51455 | lncRNA | downstream | 260847 | 21583458 ~ 21608327 (+) | True | G38155 |
| TU51471 | lncRNA | downstream | 364272 | 21686883 ~ 21693765 (+) | True | G38169 |
| XM_022669336.1 | mRNA | upstream | 25016 | 21166568 ~ 21296823 (+) | True | plce1 |
| XM_022669337.1 | mRNA | upstream | 25016 | 21166568 ~ 21296823 (+) | False | plce1 |
| XM_022669338.1 | mRNA | upstream | 25016 | 21239080 ~ 21296823 (+) | False | plce1 |
| XM_022669335.1 | mRNA | upstream | 177645 | 21142586 ~ 21144194 (+) | True | slc35g1 |
| XM_022669334.1 | mRNA | upstream | 193075 | 21109080 ~ 21128764 (+) | True | lgi1 |
| XM_007231471.2 | mRNA | downstream | 29580 | 21352191 ~ 21352892 (+) | True | LOC103044640 |
| XM_022669341.1 | mRNA | downstream | 107861 | 21430472 ~ 21474118 (+) | True | ace |
| XM_022669342.1 | mRNA | downstream | 130612 | 21453223 ~ 21474118 (+) | False | ace |
| XM_007241520.3 | mRNA | downstream | 302990 | 21625601 ~ 21629176 (+) | True | dlx3 |
| XM_022669348.1 | mRNA | downstream | 501768 | 21824379 ~ 21828127 (+) | True | LOC111192390 |
| XR_002649894.1 | other | upstream | 26549 | 21166568 ~ 21295290 (+) | False | plce1 |
| TU51357 | other | upstream | 291042 | 21019169 ~ 21030797 (+) | True | G38079 |
| TU51173 | other | upstream | 1163500 | 20157880 ~ 20158339 (+) | False | G37943 |
| TU51016 | other | upstream | 1836924 | 19481056 ~ 19484915 (+) | True | G37812 |
| TU50913 | other | upstream | 1990178 | 19329368 ~ 19331661 (+) | True | G37749 |
| trnar-ccu_1 | other | downstream | 2424858 | 23747469 ~ 23747541 (+) | True | trnar-ccu_1 |
| trnar-ccu_2 | other | downstream | 2424960 | 23747571 ~ 23747643 (+) | True | trnar-ccu_2 |
| trnar-ccu_3 | other | downstream | 2425062 | 23747673 ~ 23747745 (+) | True | trnar-ccu_3 |
| trnar-ccu_4 | other | downstream | 2425164 | 23747775 ~ 23747847 (+) | True | trnar-ccu_4 |
| trnar-ccu_5 | other | downstream | 2425266 | 23747877 ~ 23747949 (+) | True | trnar-ccu_5 |
