Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU256226 |
| length | 216 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G189052 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 12008843 ~ 12009058 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002651605.1 | lncRNA | downstream | 251734 | 11755397 ~ 11757109 (-) | True | LOC111195377 |
| TU256162 | lncRNA | downstream | 548466 | 11460088 ~ 11460377 (-) | True | G188994 |
| TU256151 | lncRNA | downstream | 703390 | 11302749 ~ 11305453 (-) | True | G188985 |
| TU256152 | lncRNA | downstream | 703390 | 11302749 ~ 11305453 (-) | False | G188985 |
| TU256140 | lncRNA | downstream | 742165 | 11264762 ~ 11266678 (-) | True | G188976 |
| TU256227 | lncRNA | upstream | 29719 | 12038777 ~ 12039088 (-) | True | G189053 |
| TU256228 | lncRNA | upstream | 31517 | 12040575 ~ 12040855 (-) | True | G189054 |
| TU256290 | lncRNA | upstream | 151484 | 12160542 ~ 12165198 (-) | True | eogt |
| TU256279 | lncRNA | upstream | 212232 | 12221290 ~ 12229525 (-) | True | G189085 |
| TU256383 | lncRNA | upstream | 288991 | 12298049 ~ 12345382 (-) | False | mapkapk3 |
| XM_022682374.1 | mRNA | downstream | 474428 | 11372257 ~ 11534415 (-) | True | suclg2 |
| XM_022682371.1 | mRNA | downstream | 853098 | 11080123 ~ 11155745 (-) | True | lrig1 |
| XM_022682819.1 | mRNA | downstream | 1148945 | 10834016 ~ 10859898 (-) | True | LOC111195430 |
| XM_007240547.2 | mRNA | downstream | 1724929 | 10224975 ~ 10283914 (-) | True | lrrc38 |
| XM_022682364.1 | mRNA | downstream | 1907186 | 10094323 ~ 10101657 (-) | True | LOC111195372 |
| XM_022682858.1 | mRNA | upstream | 48474 | 12057532 ~ 12115859 (-) | True | fam19a4 |
| XM_022682378.1 | mRNA | upstream | 154315 | 12163373 ~ 12178610 (-) | False | eogt |
| XM_007256427.3 | mRNA | upstream | 173061 | 12182119 ~ 12207582 (-) | True | tmf1 |
| XM_007256425.3 | mRNA | upstream | 221358 | 12230416 ~ 12236146 (-) | True | hmces |
| XM_022682380.1 | mRNA | upstream | 227828 | 12236886 ~ 12244320 (-) | False | tada3 |
| TU256039 | other | downstream | 1017449 | 10990817 ~ 10991394 (-) | True | G188898 |
| TU255454 | other | downstream | 2054036 | 9951985 ~ 9954807 (-) | False | LOC111195437 |
| TU254880 | other | downstream | 4617817 | 7388397 ~ 7391026 (-) | True | G187946 |
| TU254657 | other | downstream | 5026003 | 6978824 ~ 6982840 (-) | False | LOC111195363 |
| TU254662 | other | downstream | 5026061 | 6978695 ~ 6982782 (-) | False | LOC111195363 |
| TU256229 | other | upstream | 34855 | 12043913 ~ 12044293 (-) | True | G189055 |
| TU256382 | other | upstream | 323487 | 12332545 ~ 12345382 (-) | False | mapkapk3 |
| TU256647 | other | upstream | 605854 | 12614912 ~ 12619566 (-) | True | G189335 |
| XR_002651608.1 | other | upstream | 1053877 | 13062935 ~ 13076516 (-) | False | tsen2 |
| TU257791 | other | upstream | 3309586 | 15318644 ~ 15322171 (-) | False | LOC103024926 |
