Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU256481 |
| length | 901 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 3 |
| gene id | LOC111195379 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 12817187 ~ 12820082 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU256474 | lncRNA | upstream | 46538 | 12769581 ~ 12770649 (+) | True | G189216 |
| TU256486 | lncRNA | upstream | 47649 | 12769144 ~ 12769538 (+) | True | G189228 |
| TU256439 | lncRNA | upstream | 219196 | 12593483 ~ 12597991 (+) | True | G189186 |
| TU256435 | lncRNA | upstream | 251051 | 12565573 ~ 12566136 (+) | True | G189185 |
| TU256429 | lncRNA | upstream | 290567 | 12526268 ~ 12526620 (+) | True | G189182 |
| TU256497 | lncRNA | downstream | 40998 | 12860523 ~ 12861588 (+) | True | G189239 |
| TU256503 | lncRNA | downstream | 56369 | 12875894 ~ 12876136 (+) | True | G189243 |
| TU256499 | lncRNA | downstream | 61340 | 12880865 ~ 12884695 (+) | True | G189241 |
| TU256507 | lncRNA | downstream | 85806 | 12905331 ~ 12956448 (+) | True | G189246 |
| TU256511 | lncRNA | downstream | 92364 | 12911889 ~ 12916108 (+) | True | G189249 |
| XM_007254545.3 | mRNA | upstream | 106143 | 12689815 ~ 12711044 (+) | True | rrp9 |
| XM_007254547.3 | mRNA | upstream | 106143 | 12689815 ~ 12711044 (+) | False | rrp9 |
| XM_022682393.1 | mRNA | upstream | 162084 | 12624170 ~ 12655103 (+) | True | sort1 |
| XM_007254542.3 | mRNA | upstream | 194267 | 12614920 ~ 12622920 (+) | True | psma5 |
| XM_022682389.1 | mRNA | upstream | 252164 | 12547650 ~ 12565023 (+) | False | zbtb40 |
| XM_007229609.3 | mRNA | downstream | 66932 | 12886457 ~ 12902687 (+) | True | atrip |
| XM_022682397.1 | mRNA | downstream | 68197 | 12887722 ~ 12902687 (+) | False | atrip |
| XM_007229615.3 | mRNA | downstream | 121484 | 12941009 ~ 12944907 (+) | False | rab43 |
| XM_007229614.3 | mRNA | downstream | 121565 | 12941090 ~ 12948543 (+) | True | rab43 |
| XM_022682404.1 | mRNA | downstream | 182381 | 13001906 ~ 13032393 (+) | True | LOC103027930 |
| XR_002651607.1 | other | upstream | 272086 | 12530547 ~ 12545101 (+) | False | usp48 |
| TU256360 | other | upstream | 376454 | 12439603 ~ 12440733 (+) | True | G189141 |
| TU256257 | other | upstream | 581095 | 12233201 ~ 12236092 (+) | False | G189073 |
| TU256169 | other | upstream | 816534 | 11690886 ~ 12000653 (+) | False | fam19a1 |
| TU256538 | other | downstream | 176147 | 12995672 ~ 12996904 (+) | True | G189268 |
| XR_002651609.1 | other | downstream | 595544 | 13415069 ~ 13427065 (+) | False | LOC103033837 |
| TU257060 | other | downstream | 1287777 | 14107302 ~ 14108108 (+) | True | G189621 |
| TU257621 | other | downstream | 2543167 | 15362692 ~ 15365000 (+) | True | G190050 |
| TU257667 | other | downstream | 2891426 | 15710951 ~ 15721041 (+) | True | map1lc3a |
