Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU256486 |
| length | 395 |
| lncRNA type | inter_gene |
| GC content | 0.25 |
| exon number | 1 |
| gene id | G189228 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 12769144 ~ 12769538 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU256439 | lncRNA | upstream | 171153 | 12593483 ~ 12597991 (+) | True | G189186 |
| TU256435 | lncRNA | upstream | 203008 | 12565573 ~ 12566136 (+) | True | G189185 |
| TU256429 | lncRNA | upstream | 242524 | 12526268 ~ 12526620 (+) | True | G189182 |
| TU256423 | lncRNA | upstream | 245230 | 12523007 ~ 12523914 (+) | True | G189180 |
| TU256421 | lncRNA | upstream | 246934 | 12521485 ~ 12522210 (+) | True | G189179 |
| TU256474 | lncRNA | downstream | 43 | 12769581 ~ 12770649 (+) | True | G189216 |
| TU256481 | lncRNA | downstream | 47649 | 12817187 ~ 12819525 (+) | False | LOC111195379 |
| TU256497 | lncRNA | downstream | 90985 | 12860523 ~ 12861588 (+) | True | G189239 |
| TU256503 | lncRNA | downstream | 106356 | 12875894 ~ 12876136 (+) | True | G189243 |
| TU256499 | lncRNA | downstream | 111327 | 12880865 ~ 12884695 (+) | True | G189241 |
| XM_007254545.3 | mRNA | upstream | 58100 | 12689815 ~ 12711044 (+) | True | rrp9 |
| XM_007254547.3 | mRNA | upstream | 58100 | 12689815 ~ 12711044 (+) | False | rrp9 |
| XM_022682393.1 | mRNA | upstream | 114041 | 12624170 ~ 12655103 (+) | True | sort1 |
| XM_007254542.3 | mRNA | upstream | 146224 | 12614920 ~ 12622920 (+) | True | psma5 |
| XM_022682388.1 | mRNA | upstream | 204121 | 12547650 ~ 12565023 (+) | True | zbtb40 |
| XM_022682396.1 | mRNA | downstream | 48020 | 12817558 ~ 12820082 (+) | True | LOC111195379 |
| XM_007229609.3 | mRNA | downstream | 116919 | 12886457 ~ 12902687 (+) | True | atrip |
| XM_022682397.1 | mRNA | downstream | 118184 | 12887722 ~ 12902687 (+) | False | atrip |
| XM_007229615.3 | mRNA | downstream | 171471 | 12941009 ~ 12944907 (+) | False | rab43 |
| XM_007229614.3 | mRNA | downstream | 171552 | 12941090 ~ 12948543 (+) | True | rab43 |
| XR_002651607.1 | other | upstream | 224043 | 12530547 ~ 12545101 (+) | False | usp48 |
| TU256360 | other | upstream | 328411 | 12439603 ~ 12440733 (+) | True | G189141 |
| TU256257 | other | upstream | 533052 | 12233201 ~ 12236092 (+) | False | G189073 |
| TU256169 | other | upstream | 768491 | 11690886 ~ 12000653 (+) | False | fam19a1 |
| TU256538 | other | downstream | 226134 | 12995672 ~ 12996904 (+) | True | G189268 |
| XR_002651609.1 | other | downstream | 645531 | 13415069 ~ 13427065 (+) | False | LOC103033837 |
| TU257060 | other | downstream | 1337764 | 14107302 ~ 14108108 (+) | True | G189621 |
| TU257621 | other | downstream | 2593154 | 15362692 ~ 15365000 (+) | True | G190050 |
| TU257667 | other | downstream | 2941413 | 15710951 ~ 15721041 (+) | True | map1lc3a |
