Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU80640 |
| length | 449 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G59827 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 48980665 ~ 48981136 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80635 | lncRNA | downstream | 71854 | 48908280 ~ 48908811 (-) | True | G59823 |
| TU80627 | lncRNA | downstream | 157826 | 48761245 ~ 48822839 (-) | True | G59815 |
| TU80621 | lncRNA | downstream | 458456 | 48520483 ~ 48522209 (-) | True | G59809 |
| TU80579 | lncRNA | downstream | 460355 | 48519003 ~ 48520310 (-) | True | G59773 |
| TU80575 | lncRNA | downstream | 546376 | 48433944 ~ 48434289 (-) | True | G59769 |
| TU80670 | lncRNA | upstream | 56537 | 49037673 ~ 49038066 (-) | True | G59856 |
| XR_002650120.1 | lncRNA | upstream | 60108 | 49041244 ~ 49043009 (-) | True | LOC111192741 |
| TU80676 | lncRNA | upstream | 64102 | 49045238 ~ 49045987 (-) | True | G59862 |
| TU80686 | lncRNA | upstream | 77815 | 49058951 ~ 49059328 (-) | True | G59872 |
| TU80745 | lncRNA | upstream | 159457 | 49140593 ~ 49141987 (-) | True | G59920 |
| XM_022670822.1 | mRNA | downstream | 9527 | 48939737 ~ 48971138 (-) | True | LOC103035796 |
| XM_022670823.1 | mRNA | downstream | 9527 | 48939737 ~ 48971138 (-) | False | LOC103035796 |
| XM_007236993.3 | mRNA | downstream | 43340 | 48917782 ~ 48937325 (-) | True | apeh |
| XM_007236998.2 | mRNA | downstream | 63534 | 48911988 ~ 48917131 (-) | True | tlr9 |
| XM_007236997.2 | mRNA | downstream | 63574 | 48911988 ~ 48917091 (-) | False | tlr9 |
| XM_022670825.1 | mRNA | upstream | 81383 | 49062519 ~ 49192025 (-) | True | LOC103030200 |
| XM_022670833.1 | mRNA | upstream | 374401 | 49355537 ~ 49420407 (-) | True | acbd6 |
| XM_022670832.1 | mRNA | upstream | 374401 | 49355537 ~ 49418612 (-) | False | acbd6 |
| XM_007236975.3 | mRNA | upstream | 634185 | 49615321 ~ 49623205 (-) | True | LOC103029024 |
| XM_022670836.1 | mRNA | upstream | 834088 | 49815224 ~ 49868068 (-) | True | LOC103027347 |
| TU80460 | other | downstream | 1061284 | 47816355 ~ 47919381 (-) | False | selenok |
| TU80461 | other | downstream | 1061284 | 47843007 ~ 47919381 (-) | False | selenok |
| XR_002650096.1 | other | downstream | 1980001 | 46999584 ~ 47000664 (-) | True | LOC111192695 |
| TU80091 | other | downstream | 2298754 | 46623612 ~ 46681911 (-) | False | LOC103023429 |
| TU79995 | other | downstream | 2793771 | 46182741 ~ 46186894 (-) | True | G59341 |
| TU80719 | other | upstream | 81485 | 49062621 ~ 49083933 (-) | False | LOC103030200 |
| TU80777 | other | upstream | 323472 | 49304608 ~ 49305252 (-) | True | G59951 |
| TU81451 | other | upstream | 1846559 | 50827695 ~ 50832200 (-) | True | G60441 |
| TU81746 | other | upstream | 2725202 | 51706338 ~ 51708112 (-) | True | G60627 |
