Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000000_04019072_04022985.mRNA |
| length | 850 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | CI01000000_04019072_04022985 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000000 |
| NCBI id | null |
| chromosome length | 19091038 |
| location | 4019072 ~ 4023055 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0006470 | protein dephosphorylation | biological_process |
| id | description |
|---|---|
| K04382 | PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2657 | lncRNA | upstream | 34252 | 3984464 ~ 3984820 (+) | True | G2385 |
| TU2562 | lncRNA | upstream | 143376 | 3872440 ~ 3875696 (+) | False | G2293 |
| TU2563 | lncRNA | upstream | 143376 | 3875230 ~ 3875696 (+) | True | G2293 |
| TU2557 | lncRNA | upstream | 148826 | 3854191 ~ 3866427 (+) | True | G2288 |
| TU2556 | lncRNA | upstream | 148826 | 3862716 ~ 3866427 (+) | True | G2288 |
| TU2558 | lncRNA | downstream | 53472 | 4078113 ~ 4078421 (+) | True | G2289 |
| TU2565 | lncRNA | downstream | 67380 | 4090435 ~ 4092402 (+) | True | G2295 |
| TU2564 | lncRNA | downstream | 95529 | 4118584 ~ 4119862 (+) | True | G2294 |
| TU2672 | lncRNA | downstream | 121934 | 4144989 ~ 4147823 (+) | True | CI01000000_04138020_04144928 |
| TU2694 | lncRNA | downstream | 169069 | 4192124 ~ 4192354 (+) | True | G2420 |
| CI01000000_03962507_03966711.mRNA | mRNA | upstream | 52276 | 3962311 ~ 3966796 (+) | True | CI01000000_03962507_03966711 |
| CI01000000_03930421_03932454.mRNA | mRNA | upstream | 85859 | 3930421 ~ 3933213 (+) | True | CI01000000_03930421_03932454 |
| CI01000000_03919871_03926839.mRNA | mRNA | upstream | 92161 | 3918234 ~ 3926911 (+) | True | CI01000000_03919871_03926839 |
| CI01000000_03864153_03869858.mRNA | mRNA | upstream | 148846 | 3864153 ~ 3870226 (+) | False | CI01000000_03864153_03869858 |
| CI01000000_03724666_03729920.mRNA | mRNA | upstream | 289029 | 3724100 ~ 3730043 (+) | True | CI01000000_03724666_03729920 |
| CI01000000_04027941_04033360.mRNA | mRNA | downstream | 4782 | 4027837 ~ 4033822 (+) | True | CI01000000_04027941_04033360 |
| CI01000000_04036979_04044427.mRNA | mRNA | downstream | 13924 | 4036979 ~ 4044770 (+) | True | CI01000000_04036979_04044427 |
| CI01000000_04076566_04077988.mRNA | mRNA | downstream | 52963 | 4076018 ~ 4078074 (+) | False | CI01000000_04076566_04077988 |
| CI01000000_04082293_04087343.mRNA | mRNA | downstream | 59238 | 4082293 ~ 4088019 (+) | True | CI01000000_04082293_04087343 |
| CI01000000_04090995_04093696.mRNA | mRNA | downstream | 67492 | 4090547 ~ 4093745 (+) | False | CI01000000_04090995_04093696 |
| TU678 | other | upstream | 2110264 | 1815453 ~ 1908808 (+) | False | G579 |
| TU531 | other | upstream | 2586218 | 1425121 ~ 1432854 (+) | True | G435 |
| TU431 | other | upstream | 3342135 | 671842 ~ 676937 (+) | True | G350 |
| TU325 | other | upstream | 3512000 | 503209 ~ 507072 (+) | True | G252 |
| TU3086 | other | downstream | 430723 | 4453778 ~ 4454232 (+) | True | G2774 |
| TU3177 | other | downstream | 702931 | 4725986 ~ 4726482 (+) | False | G2850 |
| TU7529 | other | downstream | 6181776 | 10204831 ~ 10321679 (+) | True | G6811 |
| TU7538 | other | downstream | 6404168 | 10427223 ~ 10433018 (+) | True | G6820 |
| TU7753 | other | downstream | 6955434 | 10978489 ~ 10980872 (+) | True | G7018 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00015908 | True | 2097 | mRNA | 0.43 | 7 | NC_007125.7 | 49118860 ~ 49133426 (-) |
