Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000001_09186450_09203866.mRNA |
| length | 2557 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 19 |
| gene id | CI01000001_09186450_09203866 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 9186333 ~ 9203866 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU19443 | lncRNA | upstream | 40778 | 9144411 ~ 9145555 (+) | True | CI01000001_09132867_09145278 |
| TU19635 | lncRNA | upstream | 42499 | 9143361 ~ 9143834 (+) | True | G17507 |
| TU19513 | lncRNA | upstream | 94948 | 9088542 ~ 9091385 (+) | True | G17388 |
| TU19510 | lncRNA | upstream | 157382 | 9028681 ~ 9028951 (+) | True | G17385 |
| TU19484 | lncRNA | upstream | 157814 | 9028111 ~ 9028519 (+) | True | G17359 |
| TU19451 | lncRNA | downstream | 9590 | 9213456 ~ 9273959 (+) | True | G17326 |
| TU19474 | lncRNA | downstream | 60650 | 9264516 ~ 9291390 (+) | True | G17349 |
| TU19694 | lncRNA | downstream | 177269 | 9381135 ~ 9381660 (+) | True | G17566 |
| TU19514 | lncRNA | downstream | 180033 | 9383899 ~ 9384640 (+) | True | CI01000001_09383903_09384322 |
| TU19709 | lncRNA | downstream | 269745 | 9473611 ~ 9473929 (+) | True | G17581 |
| CI01000001_09164619_09166621.mRNA | mRNA | upstream | 19608 | 9164541 ~ 9166725 (+) | True | CI01000001_09164619_09166621 |
| CI01000001_09147684_09162673.mRNA | mRNA | upstream | 23118 | 9147684 ~ 9163215 (+) | True | CI01000001_09147684_09162673 |
| CI01000001_09132867_09145278.mRNA | mRNA | upstream | 40814 | 9132867 ~ 9145519 (+) | False | CI01000001_09132867_09145278 |
| CI01000001_09113045_09130978.mRNA | mRNA | upstream | 55011 | 9113045 ~ 9131322 (+) | True | CI01000001_09113045_09130978 |
| CI01000001_09059083_09101251.mRNA | mRNA | upstream | 84981 | 9058864 ~ 9101352 (+) | True | CI01000001_09059083_09101251 |
| CI01000001_09226223_09227218.mRNA | mRNA | downstream | 22223 | 9226089 ~ 9227246 (+) | True | CI01000001_09226223_09227218 |
| CI01000001_09267532_09267951.mRNA | mRNA | downstream | 63596 | 9267462 ~ 9268132 (+) | True | CI01000001_09267532_09267951 |
| CI01000001_09285920_09289361.mRNA | mRNA | downstream | 81922 | 9285788 ~ 9289441 (+) | True | CI01000001_09285920_09289361 |
| CI01000001_09308544_09311741.mRNA | mRNA | downstream | 102835 | 9306701 ~ 9312011 (+) | False | CI01000001_09308544_09311741 |
| CI01000001_09334528_09350703.mRNA | mRNA | downstream | 130662 | 9334528 ~ 9351363 (+) | True | CI01000001_09334528_09350703 |
| TU19348 | other | upstream | 1153850 | 8032124 ~ 8032483 (+) | True | G17234 |
| TU19033 | other | upstream | 1645747 | 7532572 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
| TU19037 | other | upstream | 1645747 | 7532640 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
| TU19034 | other | upstream | 1645873 | 7532764 ~ 7540460 (+) | True | CI01000001_07531945_07539781 |
| TU17891 | other | upstream | 3471382 | 5711885 ~ 5714951 (+) | True | G15995 |
| TU19478 | other | downstream | 12156 | 9216022 ~ 9228859 (+) | True | G17353 |
| TU19479 | other | downstream | 30597 | 9234463 ~ 9240677 (+) | True | G17354 |
| TU19459 | other | downstream | 214462 | 9418328 ~ 9438063 (+) | True | G17334 |
| TU21219 | other | downstream | 1036034 | 10239900 ~ 10241492 (+) | True | G18896 |
| TU21190 | other | downstream | 1053246 | 10257112 ~ 10260714 (+) | True | G18873 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00043080 | False | 5982 | mRNA | 0.44 | 27 | NC_007134.7 | 25354856 ~ 25448872 (+) |
