RNA id: TU26505


Basic Information

Item Value
RNA id TU26505
length 747
lncRNA type antisense_over
GC content 0.45
exon number 2
gene id G23485
representative True

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1395449 ~ 1396836 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAAAATATCTTTTGTGTTCCACAGAAGAAAGTAAGTCATACAGGCTTGGAATGACATTAACGTGAGTAAATGATAACAGAATTGTAATTTCTGGGTGAATTATCCCTTTATGGATGAGGTAGGTGACGCTCACTGGCAGCATAGCTTCAGCCCACTCTCCATGTCCTCTCTGGAGAAGTTTGATGCGGTCAATGTCATAGCAGATCTGGACCAAGTCTCCCACCATGAACTGAGAGCTGCCTCCCTCAGCACCAGCCGCCACCTCTCCACTACGTACGACATTTGCCTTGGTTAGCACTGCTGGGTTAAACGTCCACGTTTCCACTAGGATACTGCACAACAATGTCATGGTCTTCATCAATGCCACACACAGTGCCTGTGGTGGTGAGCGTTTCAAACATGCCATCAGTCCAGCCTCCGTGACCGTGCTGCAGCGACTGAACGATCTCCAGGTCCAAATCAATGTTGACCAAGTCTCCGATCTGCAGGCCTCCAGGGTTCCTGTTTCCATTCTGTTCACCTACAGAATGTCACAGAGGAATGAGTTGGATTATCAATAGAACAACCAGGGACTTCTCATGGTCATTATCATCTGAGACCAGTATTCATAATTCTATTGTGACTAACGGTTTTTTTAAAAAAAAGAACTGAGCAAAATTCTGCAATGGCCCAGTCATGCTTAAAGGGTTAGTTCACCCAAAAATGAAAATTATGTCATTAATTACTCACCATCATGTCATTCCACAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU26482 lncRNA downstream 67487 1327518 ~ 1327962 (-) True G23463
TU26477 lncRNA downstream 83384 1311582 ~ 1312065 (-) True G23458
TU26396 lncRNA downstream 318143 1076919 ~ 1077306 (-) True G23393
TU26395 lncRNA downstream 322897 1072330 ~ 1072552 (-) True G23392
TU26394 lncRNA downstream 323529 1071541 ~ 1071920 (-) True G23391
TU26500 lncRNA upstream 19973 1416809 ~ 1421558 (-) True G23481
TU26501 lncRNA upstream 48395 1445231 ~ 1449301 (-) False G23482
TU26502 lncRNA upstream 48395 1445231 ~ 1449391 (-) True G23482
TU26498 lncRNA upstream 54064 1450900 ~ 1452728 (-) True G23479
TU26540 lncRNA upstream 59798 1456634 ~ 1456846 (-) True G23520
CI01000003_01368353_01374263.mRNA mRNA downstream 21186 1368353 ~ 1374263 (-) True CI01000003_01368353_01374263
CI01000003_01348419_01352984.mRNA mRNA downstream 42465 1346599 ~ 1352984 (-) True CI01000003_01348419_01352984
CI01000003_01200556_01220189.mRNA mRNA downstream 175260 1200052 ~ 1220189 (-) True CI01000003_01200556_01220189
CI01000003_01194276_01196374.mRNA mRNA downstream 198430 1193316 ~ 1197019 (-) True CI01000003_01194276_01196374
CI01000003_00806620_00830978.mRNA mRNA downstream 563826 806351 ~ 831623 (-) True CI01000003_00806620_00830978
CI01000003_01424386_01424816.mRNA mRNA upstream 27514 1424350 ~ 1424915 (-) True CI01000003_01424386_01424816
CI01000003_01601113_01624224.mRNA mRNA upstream 204129 1600965 ~ 1624224 (-) True CI01000003_01601113_01624224
CI01000003_01632757_01671893.mRNA mRNA upstream 233771 1630607 ~ 1671893 (-) True CI01000003_01632757_01671893
CI01000003_01807697_01809455.mRNA mRNA upstream 410294 1807130 ~ 1809455 (-) True CI01000003_01807697_01809455
CI01000003_01836259_01849326.mRNA mRNA upstream 439364 1836200 ~ 1849326 (-) True CI01000003_01836259_01849326
TU25632 other downstream 1325705 50512 ~ 69744 (-) True G22716

Expression Profile