RNA id: CI01000004_07621014_07632760.mRNA



Basic Information


Item Value
RNA id CI01000004_07621014_07632760.mRNA
length 6095
RNA type mRNA
GC content 0.45
exon number 37
gene id CI01000004_07621014_07632760
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7620925 ~ 7632760 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGGAGAATATGTATTCCTGTGACTCACACAAAAGATATTCAGCATTCCTGGCCATCAGCCTGAACTCTTACAATGGTGCACCTCTGCCAGGGCACAGAAAGATTGGCTTGTTTAATGTGTTTGATGTGGAGGGGGCTCACAGGTTAACAATGGGTGATGCTGAAATGGCAGTTTTTGGGGCCGCAGCTCCTTACCTGCGGAAATCCGACAGGGAGCGTCTTGAGGCGCAAACGAAACTATTCGACTTAAAGAAGGAATGCTTTGTGCCGGATCCAGTGGAGGAGTTTGTTAAAGCCACCATCACAAGTCGAGAGGGTGACAAAGTCACTGTGGAGACAGAGAGAGGGAAGACTGTTACAGTCAAAGAGAGTGAAATTATGCAACAGAATCCCCCCAAATTTGATAAAATTGAAGACATGGCGATGCTGACCTTTCTCAATGAGCCTGCTGTGCTGTTTAACCTCAAAGAGCGTTATGCAGCATGGATGATCTATACGTACTCAGGGCTGTTCTGTGTCACCGTCAACCCTTACAAGTGGCTGCCAGTGTACAATCAGGAGGTGGTTACAGCCTATAGAGGGAAGAAGAGGAGTGAAGCTCCTCCTCACATCTATTCCATCTCTGATAACGCCTACCAGTACATGCTGGCAGACCGAGAAAACCAGTCTATTCTTATCACTGGAGAGTCTGGTGCTGGGAAAACTGTGAATACTAAAAGAGTCATTCAGTACTTTGCCAGCATTGCAGCAAGTGGAGTGAAGAAGGACTTGACTGCTCAGAACAAGGGAACCCTGGAGGATCAAATTATACAGGCTAACCCTGCATTGGAGGCCTTTGGTAATGCTAAGACCATCAGAAATGACAACTCCTCAAGATTTGGAAAATTTATTCGAATTCACTTCGATACAAGGGGGAAACTGGCATCTGCTGACATTGAAACATACCTCCTGGAGAAGTCTCGTGTGACCTTTCAGTTAAAGGCTGAGAGAGACTATCACATCTTCTATCAAATCTTGTCCAACAAAAAACCTGAGATCCTTGAGATGTTACTAGTGACAGCAAACCCCTATGACTACGCATTCATCTCTCAGGGAGAGACCACAGTTCCTTCCATTGATGATGCTGAGGAGTTAATGGCCACTGATAGTGCCTTTGATATCTTGGGCTTCACACAAGAAGAAAAGAACTCTGTGTACAAACTGACTGGAGCCATTATGCACTACGGCAACATGAAGTTCAAGCAAAAGCAGCGAGAGGAACAAGCAGAATCTGATGGAACTGAAGATGCTGACAAAGCAGCATATCTAATGGGTCTAAATTCTGCTGACCTCATTAAGGGTCTTTGCCATCCAAGGGTCAAAGTTGGAAACGAGTGGGTCACCAAAGGACAAAATGTCCAGCAAGTGAACTACGCTATCGGAGCCTTATCAAAATCAGTGTATGAGAAAATGTTTCTCTGGATGGTGGTGAGAATCAACCAGTCTCTGGAGACCAGGCAGCCTCGCCAGTACTTCATTGGAGTGTTGGATATTGCTGGCTTTGAGATCTTTGATTTCAACACCTTTGAGCAACTCTGCATCAACTTTACAAATGAGAAACTGCAACAGTTTTTCAACCACCACATGTTTGTGCTGGAACAAGAGGAGTATAAGAAAGAAGGGATCGAATGGGAGTTCATTGACTTTGGCATGGACTTACAGGCCTGCATCGATCTCATTGAGAAACCTATGGGCATCATGTCGATCCTTGAAGAGGAATGCATGTTTCCCAAAGCCAGTGATACAACCTTTAAAGCAAAGCTTTATGACAACCACCTTGGGAAATCAAACAACTTCCAGAAACCCAGGATTGTGAAGGGCAAGCCAGAGTCTCACTTTGCCCTGGTTCACTATGCTGGTATAGTGGATTACAACATCAACAACTGGCTGGTAAAGAATAAGGACCCCCTCAATGAAACCGTGGTTGGACTGTACCAGAAATCTTCACTGAAGTTGTTGGCTTTATTGTTTGCCAACTATTGTGTAGATTCAGCTGACAGTGCAAGTGGAAAAAAAGAAAAGAAGAAGAAAGGGTCATCTTTCCAGACAGTGTCTGCACTTCACAGGGTATGTCAATGCCTGTTAATACCTAAAAACTATTTGTTCTATCCTAGTCAAAATTTGCTAACAAGTGATTCTTTACAGGAGAATCTTAACAAGCTAATGACAAACCTGAGATCAACACATCCTCACTTTGTACGGTGCATCATCCCCAATGAGACAAAGACTCCTGGTGCGATGGAGAACCCTTTGGTCATGCACCAACTGCGCTGTAACGGTGTACTAGAAGGCATTAGGATCTGCAGGAAGGGCTTCCCTAACAGAATCCTGTATGGGGACTTTAAACAGAGATATCGCATCTTAAACCCTGCAGCTATCCCTGAGGGACAGTTCATAGACAGCAAGAAAGGAGCAGAGAAACTGCTGGGTTCTCTGGAGATCGACCACCAGCAGTACAGGTTTGGGCACACTAAGGTATTTTTTAAGGCTGGTCTTCTTGGCCAACTGGAGGAGATGAGAGATGAGCGTCTATCAAAGATAATCACTTCAATTCAAGCAAGGTCTCGTGGTCTTCTCTCAAGGGCTGAGTACCAAAAGATGTGGAATGTACGTGCATTCATGAGTGTCAAGAATTGGCCCTGGATGAAACTCTTCTTTAAAATTAAACCATTACTGAGATCTGCTGAAGCAGAGAAGGAAATGGCCAATATGAAAGAGGAGTTCTTGAAGCTCAAGGAAGCTTATGCAAAGTCTGAAGCTCGTAGAAAAGAACTTGAGGAAAAAATGGTGACTCTTCTTCAAGAAAAGAATGACCTTCAACTTCAAGTGCAGGCGGAACAAGACAATCTCTGTGATGCTGAAGAGCGGTGTGAAGGTCTGATCAAAAATAAGATTCAGATGGAGGCTAAAACCAAAGAGCTCACAGAGCGGCTTGAGGATGAGGAGGAGATGAACGCAGAGCTGACAGCCAAGAAGAGAAAGCTGGAGGATGAATGCTCTGAGCTGAAGAAAGATATTGATGATCTGGAGCTGACTCTGGCTAAAGTGGAGAAAGAGAAGCATGCTACTGAGAACAAGGTGAAGAACCTGACAGAAGAAATGGCAGCTTTAGATGATATCATTGCCAAGCTGACAAAAGAGAAAAAAGCCCTTCAGGAAGCTCATCAGCAGACACTGGATGACCTGCAAAGTGAGGAGGACAAAGTCAACACCCTCACTAAGGCAAAAGTAAAGCTAGAGCAGCAGGTGGATGATCTTGAAGGATCTCTAGAGCAAGAAAAGAAAATCCGAATGGATCTAGAAAGAGCTAAAAGGAAACTTGAAGGAGATTTGAAGTTAACCCAGGAGAGTATAATGGACCTGGAGAATGACAAGCAGCAACTGGAAGAACGACTGAAGAAAAAAGACTTTGAAATCAGTCAGCTCAACAGTAAAATTGATGATGACCAAAACATAATTATCCAACTACAAAAGAAAATCAAGGAGCTGCAGGCTCGAGTTGAGGAGTTGGAGGAAGAGCTTGAGGCAGAAAGAGCTGCCAGAGCCAAGGTGGAGAAACAGAGAGCAGATTTAGCCAGAGAGCTGGAAGAGATCAGTGAGAGACTGGAGGAGGCTGGAGGATCTACAGCTGCTCAGATTGAGATGAATAAGAAACGAGAGGCAGAGTTTCAGAAACTTCGCAGAGACCTTGAAGAGGCCACTCTGCAGCATGAGGCCACTGCCGCCACACTGAGAAAGAAACAAGCTGACAGTGTGGCTGAACTCGGAGAGCAGATAGACAATTTGCAGAGAGTCAAGCAAAAACTGGAAAAGGAGAAAAGTGAACTCAAGCTGGAGCTGGATGATGTGGTCTCCAGCATGGAGCATATTGTCAAGTCCAAGACTAATATGGAGAAAATGAACAGAACTCTGGAAGATCAACTGAATGAATTCCGTAACAAGTGTGAAGAAACTCAAAGGACCCTCAATGACTTTACAACCCAGAAGGGAAAGCTTCAGGCAGAAAATGATGAATATGCGAGACAGATAGAAGAAAAGGAATCATTAATCTCTCAGCTGACAAGGGGTAAGAACTCCTTTAGTCAACAACTGGAGGACTTGAAAAGGCAGTTAGATGAAGAAATGAAGGCGAAAAATGCTCTCGCCCATGCACTGCAATCAGCCCGGCATGACACAGATCTGCTCAGAGAGCAGTATGAGGAGGAGCAGGAGGCCAAAGCAGAGCTACAGAGAAGCATGTCTAAGGCTAATTCTGAGGTGGCTCAGTGGAGAACCAAGTATGAAACTGATGCCATACAGAAGACTGAGGAGCTGGAGGAAGCAAAGAAGAAACTGGCACAGCGTTTGCAGGAGGCTGAGGAGGCCGTGGAGGCAGTAAATGCTAAATGCTCTTCCCTTGAAAAGACTAAACACAGACTCCAGAATGAAATCGAAGATTTGATGGTGGATGTGGAGAGATCCAACACTGCTGCTGCAGCTTTAGACAAGAAACAAAGACACTTTGATAAGGTCTTATCTGAATGGAAACAGAAGTATGAGGAGTCTCAGTGTGAACTGGAGAGCTCTCAGAAGGAGGCAAGATCTTTGAGCACAGAACTGTTCAAGCTGAAGAACTCCTATGAGGAATCGTTGGATCACCTGGAGACCATGAAGAGAGAGAACAAGATTCTGCAAGAGGAGATCACTGATCTGACCGAACAGCTTGGCGAGAGTGGGAAGACAATCCATGAGTTGGAGAAGGTCCGTAAACAGCTGGAACAAGAAAAAGCAGAGATACAAGCTGCTCTAGAAGAGGCCGAGGGTTCTCTGGAGCATGAGGAGGGTAAAATCCTGAGGGCCCAGCTAGAATTTAACCAAATAAAAGCTGACATTGAGCGCAAGCTGACTGAGAAAGATGAGGAATGGGAGCAGTCAAAGAGAAACCAACAGAGGACCATAGACACCTTGCAAAGTGCTTTGGAGTCTGAAACTCGTAGCAGGAATGAGGCTCTCAGGATAAAGAAGAAGATGGAAGGAGATCTAAATGAAATGGAGATCCAGCTGAGCCAGGCTAACAGACAGGCAGCTGAGGCTCAAAAACAACTCAAGTCTGTCCAGGCCCATCTGAAGGACTCCCAGCTTCAGCTTGATGACTCTCTTCGAGCCAATGATGATCTGAAGGAGAACATTGCAATTGTAGAGAGACGCAATACCTTGCTTCAGGCCGAACTGGAGGAGCTTAGGGCTGTTCTGGAACAAGCAGAGCGGGGACGCAAACTTTCTGAGCAAGAGCTGCTCGATGTCACTGAGAGAGTACAGCTTCTGCATTCTCAGAACACCAGTCTCATAAACCAGAAGAAGAAGCTGGAGGCTGACGCATGCCAGCTTCAGAGTGAGGTGGAAGAGGCAGTGCAAGAATGCAGGAATGCTGAAGAAAAAGCCAAGAAGGCCATCACTGATGCTGCCATGATGGCTGAGGAACTAAAGAAGGAGCAAGACACAAGTGCTCACCTGGAGCGTATGAAGAAGAACATGGAGCAGACCATTAAAGATCTGCAGCACCGTCTGGATGAAGCAGAACAAATCGCTATGAAAGGAGGAAAGAAACAAGTTCAGAAACTGGAGGCTAGGGTAAGAGAGCTGGAAGGTGAAGTTGAGGCTGAACAGAAGAGAAGCAGTGAGTCTGTGAAGGGAATCCGTAAATATGAACGCCGCATCAAGGAGCTTACATATCAGACTGAAGAGGACCGTAAAAACATAGCCCGTCTTCAGGATTTGGTCGACAAGCTGCAACTAAAAGTCAAAGCTTACAAACGAGTCGCAGAGGAAGCTGAAGAACAGGCAAACAATCACCTCGGCAAATTCCGTAAGCTGCAGCATGAACTAGATGAGGCAGAGGAAAGGGCTGATATTGCTGAATCTCAAGTGAACAAACTACGTGCCAAAAGTCGTGATGTGGGGCCAAAGAAAGGATTTGATGAAGAGTGAAGTCTTGGAAATCTTCTGAAATCACCTTTATTTGCTTGCCATTCTCTCTGAGTGTACACTATTGTGTTTCCTCACTTACATGAAATAAA

Function


GO:

id name namespace
GO:0055010 ventricular cardiac muscle tissue morphogenesis biological_process

KEGG:

id description
K17751 MYH6_7; myosin heavy chain 6/7

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU33482 lncRNA downstream 66592 7552532 ~ 7554333 (-) True G29575
TU33474 lncRNA downstream 90590 7530126 ~ 7530335 (-) True G29568
TU33217 lncRNA downstream 233069 7387581 ~ 7387856 (-) True G29343
TU33205 lncRNA downstream 233528 7385073 ~ 7387397 (-) True G29334
TU33402 lncRNA downstream 298034 7322651 ~ 7322891 (-) True G29511
TU33505 lncRNA upstream 32997 7665757 ~ 7665994 (-) True G29598
TU33457 lncRNA upstream 126898 7759658 ~ 7761020 (-) True G29551
TU33449 lncRNA upstream 142513 7775273 ~ 7780067 (-) False G29544
TU33450 lncRNA upstream 142513 7775273 ~ 7780067 (-) True G29544
TU33446 lncRNA upstream 165790 7798550 ~ 7800281 (-) True G29542
CI01000004_07606787_07617579.mRNA mRNA downstream 3346 7606698 ~ 7617579 (-) True CI01000004_07606787_07617579
CI01000004_07481146_07504328.mRNA mRNA downstream 116597 7480733 ~ 7504328 (-) True CI01000004_07481146_07504328
CI01000004_07424499_07454604.mRNA mRNA downstream 166321 7423615 ~ 7454604 (-) True CI01000004_07424499_07454604
CI01000004_07388945_07408147.mRNA mRNA downstream 212778 7388461 ~ 7408147 (-) True CI01000004_07388945_07408147
CI01000004_07331060_07339831.mRNA mRNA downstream 281094 7330875 ~ 7339831 (-) True CI01000004_07331060_07339831
CI01000004_07646516_07653787.mRNA mRNA upstream 13154 7645914 ~ 7653787 (-) True CI01000004_07646516_07653787
CI01000004_07656773_07666677.mRNA mRNA upstream 23431 7656191 ~ 7666677 (-) True CI01000004_07656773_07666677
CI01000004_07670856_07673369.mRNA mRNA upstream 37752 7670512 ~ 7673952 (-) True CI01000004_07670856_07673369
CI01000004_07693733_07699887.mRNA mRNA upstream 60724 7693484 ~ 7699887 (-) True CI01000004_07693733_07699887
CI01000004_07705722_07707545.mRNA mRNA upstream 72947 7705707 ~ 7707845 (-) True CI01000004_07705722_07707545
TU33263 other downstream 989018 6631293 ~ 6631907 (-) True G29388
TU33056 other downstream 1075353 6534827 ~ 6545572 (-) True G29204
TU31692 other downstream 1993411 5620383 ~ 5627514 (-) True CI01000004_05617072_05627369
TU31341 other downstream 2417201 5178227 ~ 5203724 (-) False G27746
TU33567 other upstream 331604 7964364 ~ 7965500 (-) True G29656
TU33669 other upstream 721738 8354498 ~ 8358127 (-) False G29746
TU33670 other upstream 721738 8354498 ~ 8358127 (-) True G29746
TU34309 other upstream 1745177 9377937 ~ 9406921 (-) True G30316
TU35313 other upstream 3113677 10746437 ~ 10750641 (-) True G31203

Expression Profile