RNA id: CI01000005_07622471_07624184.mRNA


Basic Information

Item Value
RNA id CI01000005_07622471_07624184.mRNA
length 1644
RNA type mRNA
GC content 0.46
exon number 4
gene id CI01000005_07622471_07624184
representative True

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 7621340 ~ 7624184 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAGAGAGAAATGGCAGAAACACACAAAAATGAGTTTCAGCTTGTTGGTCCTGAAAAACATCGAGTTCATGTGTCAGTAGGGTCTGAATTCACAGTGCGATGTCACCTGTCTCCTAAAGTCAGTGCTGTTGACATGGAGATCATTTGGTTTAAGGAGACAAACTGTGTGTGTCTCTATAAGAACAAAGAGGTGATTGAGGGGAGGGGATATGAGGGCAGAGTGAGACTGTTCAAAAGCAAGAGAGGAAAAATTTCCTTACTCATGAGAGAGTTCAGAGAATTCGATGTTGGAGATTATCTGTGTCAGGTCACCTGTGCAGACAAAACAGAGGAGATAACAGTAGGAGTAAGAGAGCTGCAAGCAGAGAGACCAGCAGAATTCCCAGCACAAACTTATTTGCTAGTTGCTGATGAGGAGCTCATCTACCGGGTCCACACTATCCTCGATTCGCAACGGCGGGGCAACCGACTGGAATATCTCATTGACTGGGAAGGTTACGGCCCAGAAGAATGATCCTGGATCGCCCGAGACGATGTGCTAGATCCGTCATTACTCATTCAATTCCACGAAGAACATCCCGACCTTCCTGCTCCCAGAGGTCAAAGTCGTCCCCGTCGTCACACCATCTGGCCATCAAGAGCCGCCCGTGGAGGAGGGGGTACTGTCACAGAGTCAACCACACCATCATTCCATCAGTCAACACCAGATCGTCACACTACACCCACTCGTTCACAATCACCCAAATACTGATTCCCTGCACCTGCACTTCCTCATCAACGCACCCTATATCTACCGTCATCACCTCCACTTCATTGTCTGGTCTCGTTCATGCAACAAAGACACACAGACTACCTACCAGCTTACTCACCTGAGATTGCCGAATCCTGTCATTCTTCTTTTGTCTTCAGTCATCCTCCATCTGGATTCCAGTTCGCCAGCATTCTGCCCTGCTCAGGCAAACCATCGGAGGTTCCAGCTGTCACTCACTGGTTTGAGGAGAGCGAGAGGGCTTGGGACTTTGGAACCAAGTCTGTATTTTTTAAAATGTGACGGTACCAGCATTTCCCACTTGCATTTTGAGCACTGTTGAGCGGATTCTTAAACACCTGTGATTGGCCATTGTGTTCACGCACTCAACAGATGTGTCTGTGATTGGCTACAATGATCAATGCTTCAAAAACATGTTATAGACTTCTTTGATGCTCTTCACCGAGTGCTTACACAGATAGTGTTTGAAAGCAAGCATCTATCAGCGGATCCGTCTATCAGCGGATATATAGTTACAGCATGTTTTTGAAGCGTTGATCATTGTAGCCAATCACAGACATATCTGTTGAGTGCGTGAACACGATGGCCAATCAGAGGTGTTTAAGACTCAACTCAACAACAATCAAAATGCTAGGGGGAAATGCTTGTATAGTCACATTTAAAAAAAAAATACAGACTTGGTTCCAAAGTCCCAAACCCTCTCGCTCTCCTCAAACCAGTGAGTGACAGCTGGAACCTCCGATGGTTTGCCTGAGCAGGGGAACAGAGAAGGTTGGTATCCTAGGGTACACTGGAATGGAGTGAGCCCAGTGTTGGTTTGACGGAGGGAATTCTGGGTGTACTAGTGACAACACTAGTTTTAATTAAACCAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46088 lncRNA downstream 15061 7606049 ~ 7606279 (-) True G40604
TU46084 lncRNA downstream 18375 7600545 ~ 7602965 (-) True G40602
TU46066 lncRNA downstream 136817 7484324 ~ 7484523 (-) True G40586
TU46065 lncRNA downstream 139618 7481523 ~ 7481722 (-) True G40585
TU46060 lncRNA downstream 153102 7458821 ~ 7468238 (-) True G40580
CI01000005_07617632_07620944.mRNA mRNA downstream 396 7617565 ~ 7620944 (-) True CI01000005_07617632_07620944
CI01000005_07593934_07596058.mRNA mRNA downstream 25282 7593926 ~ 7596058 (-) True CI01000005_07593934_07596058
CI01000005_07591912_07592984.mRNA mRNA downstream 28349 7591912 ~ 7592991 (-) True CI01000005_07591912_07592984
CI01000005_07436839_07437813.mRNA mRNA downstream 182916 7436065 ~ 7438424 (-) True CI01000005_07436839_07437813
CI01000005_07398684_07399164.mRNA mRNA downstream 222176 7398487 ~ 7399164 (-) True CI01000005_07398684_07399164
TU46013 other downstream 89192 7526221 ~ 7532148 (-) True G40540
TU45920 other downstream 424912 7195795 ~ 7196428 (-) True G40487
TU45564 other downstream 1137851 6480689 ~ 6483489 (-) True G40190
TU44763 other downstream 1786801 5833792 ~ 5834539 (-) True G39515
TU44762 other downstream 1786948 5833792 ~ 5834392 (-) False G39515

Expression Profile