RNA id: TU164703



Basic Information


Item Value
RNA id TU164703
length 211
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G144962
representative True

Chromosome Information


Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 470644 ~ 470854 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTGAGTGGCACTAAAAGTCTGTTCAGATTTATCTGAAACAGATGAACGTGAATCTGGCAAAGTTTTATTATGTTGGTTGTTATACAGCAGTTCGCAAATGAAATGTTCGGTGAGTGGTGCTACAAGGTTAATGCACACATTTGAAAATAACATCCACCTACACTAAACTTGACCGTAAACCTGAGTGATAGTGCTAACAAAAGCAAACGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU164702 lncRNA downstream 257 470063 ~ 470387 (-) True G144961
TU164693 lncRNA downstream 19491 450547 ~ 451153 (-) True G144952
TU164687 lncRNA downstream 50524 419804 ~ 420120 (-) True G144946
TU164652 lncRNA downstream 224570 214539 ~ 246074 (-) True G144915
TU164549 lncRNA downstream 278028 161248 ~ 192616 (-) True G144827
TU164704 lncRNA upstream 1253 472107 ~ 472418 (-) True G144963
TU164710 lncRNA upstream 21061 491915 ~ 521930 (-) True G144965
TU164731 lncRNA upstream 35298 506152 ~ 507402 (-) True G144981
TU164747 lncRNA upstream 54992 525846 ~ 534200 (-) True G144989
TU164771 lncRNA upstream 86738 557592 ~ 557844 (-) True G145009
CI01000028_00444425_00447507.mRNA mRNA downstream 23137 444425 ~ 447507 (-) True CI01000028_00444425_00447507
CI01000028_00443151_00444100.mRNA mRNA downstream 26544 443131 ~ 444100 (-) True CI01000028_00443151_00444100
CI01000028_00363732_00407780.mRNA mRNA downstream 62468 363106 ~ 408176 (-) True CI01000028_00363732_00407780
CI01000028_00346500_00350741.mRNA mRNA downstream 118585 346425 ~ 352059 (-) True CI01000028_00346500_00350741
CI01000028_00331781_00342935.mRNA mRNA downstream 127709 331168 ~ 342935 (-) True CI01000028_00331781_00342935
CI01000028_00474810_00475211.mRNA mRNA upstream 3828 474682 ~ 475211 (-) False CI01000028_00474810_00475211
CI01000028_00534236_00534848.mRNA mRNA upstream 63353 534207 ~ 534848 (-) True CI01000028_00534236_00534848
CI01000028_00563476_00575567.mRNA mRNA upstream 91257 562111 ~ 578365 (-) True CI01000028_00563476_00575567
CI01000028_00616942_00640490.mRNA mRNA upstream 145536 616390 ~ 642176 (-) True CI01000028_00616942_00640490
CI01000028_00704858_00705817.mRNA mRNA upstream 233916 704770 ~ 706767 (-) True CI01000028_00704858_00705817
TU164584 other downstream 334768 135392 ~ 135876 (-) False G144855
TU164582 other downstream 334787 135392 ~ 135857 (-) False G144855
TU164620 other upstream 2755 475313 ~ 475346 (-) True G144886
TU166103 other upstream 1626716 2097570 ~ 2111265 (-) True G146190
TU166174 other upstream 1676524 2147378 ~ 2160038 (-) True G146238
TU166214 other upstream 1970478 2445722 ~ 2446313 (-) True G146272
TU169615 other upstream 6228659 6699513 ~ 6701240 (-) True G149329

Expression Profile