RNA id: TU246999


Basic Information

Item Value
RNA id TU246999
length 251
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G217731
representative True

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 943514 ~ 974530 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTAAATTTTAGGGTTAGTGATGTCACTAACCCGGGAAGAAGCTTGTTGTAGTCCCTACCAGCCGTTTGTTGTAGTCCTTAAACAGAGATTTCTGTAAAAGAAAATATCTCCCTTTGCATTGAACTTTGAGCGTCGTAACTTTGCAGATGTTGTTTATGTTCAAACAGCAACATTACACACTAACTAAAGTTAAAAAAGTGATTCAAATCTGATGGACAAACGCAATTGCGTGCCATTATACTTCATCACGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU246966 lncRNA downstream 52191 890946 ~ 891323 (-) True G217698
TU246956 lncRNA downstream 72233 870337 ~ 871281 (-) True G217688
TU246921 lncRNA downstream 177576 765579 ~ 765938 (-) True G217660
TU246902 lncRNA downstream 228929 713773 ~ 714585 (-) True G217647
TU246758 lncRNA downstream 254987 683662 ~ 688527 (-) True G217513
TU246767 lncRNA upstream 82998 1112020 ~ 1112123 (-) True G217522
TU247050 lncRNA upstream 163952 1138482 ~ 1138785 (-) True G217779
TU247054 lncRNA upstream 175711 1150241 ~ 1150465 (-) True G217783
TU247056 lncRNA upstream 176759 1151289 ~ 1151708 (-) True G217785
TU247060 lncRNA upstream 180831 1155361 ~ 1155578 (-) True G217789
CI01000051_00846746_00856041.mRNA mRNA downstream 87473 846502 ~ 856041 (-) True CI01000051_00846746_00856041
CI01000051_00824615_00825825.mRNA mRNA downstream 117438 824615 ~ 826076 (-) True CI01000051_00824615_00825825
CI01000051_00809947_00817933.mRNA mRNA downstream 125581 809947 ~ 817933 (-) True CI01000051_00809947_00817933
CI01000051_00787723_00808318.mRNA mRNA downstream 134490 787723 ~ 809024 (-) True CI01000051_00787723_00808318
CI01000051_00761469_00766842.mRNA mRNA downstream 176672 761453 ~ 766842 (-) True CI01000051_00761469_00766842
CI01000051_01015039_01066156.mRNA mRNA upstream 40276 1014806 ~ 1066317 (-) False CI01000051_01015039_01066156
CI01000051_01371462_01386606.mRNA mRNA upstream 396932 1371462 ~ 1386606 (-) True CI01000051_01371462_01386606
CI01000051_01468663_01486168.mRNA mRNA upstream 493889 1468419 ~ 1487172 (-) True CI01000051_01468663_01486168
CI01000051_01511542_01512516.mRNA mRNA upstream 536613 1511143 ~ 1512554 (-) True CI01000051_01511542_01512516
CI01000051_01528013_01535266.mRNA mRNA upstream 553379 1527909 ~ 1535266 (-) True CI01000051_01528013_01535266
TU246773 other downstream 376359 567040 ~ 567155 (-) True G217528
TU246751 other downstream 537719 400676 ~ 405795 (-) True CI01000051_00394082_00407612
TU246745 other downstream 547532 395231 ~ 395982 (-) False CI01000051_00394082_00407612
TU246796 other downstream 660885 282195 ~ 282629 (-) True CI01000051_00278614_00302552
TU246734 other downstream 700488 242582 ~ 243026 (-) True G217491
TU247764 other upstream 734768 1709298 ~ 1709307 (-) True G218433
TU248069 other upstream 1552813 2527343 ~ 2546459 (-) True G218728
TU248216 other upstream 1865740 2840270 ~ 2840632 (-) True G218861
TU249434 other upstream 1985058 2961403 ~ 2961494 (-) True G219914
TU249582 other upstream 3181200 4155730 ~ 4158103 (-) True G220041

Expression Profile