RNA id: CI01000059_02068570_02070710.mRNA



Basic Information


Item Value
RNA id CI01000059_02068570_02070710.mRNA
length 470
RNA type mRNA
GC content 0.48
exon number 2
gene id CI01000059_02068570_02070710
representative False

Chromosome Information


Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 2068544 ~ 2071924 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTGACGTTCAGTCGACCTTCTACTGCGGGAGATACGGACATCCAAACATCTCCATCCGCAGTGTCTCAAATATACCTCTTATTGAAGTATGGCGAGCCAGTCTCAGGGCATCCAGCAGCTGCTGCAGGCCGAGAAAAGAGCCGCAGAAAAGGTCGCTGAAGCCCGTAAAAGCACTAGGGTCCCATGGAAACTCTGCTGTAGAGGTGGATAAGGAGACCATTGATAAGATGAGACGCATCCAGAGCAGTTTTCAGCAGAATAAGGAGGCTGTGCTTGGAAACCTGCTGAAGATGGTGTGCGACATTAAGCCAGAGATCCACGCCAATTACCGCGTCTCTGGATAAACAGCTCTGTCCAACCACCACATCCGTTACAATCTCTAAAGGCCCACAAAGCACTGAGACAAAGACTGCTACTGGACATATCACGTTACAATCATAATATTAAAAATCATTGGACTACTCTGCTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU286107 lncRNA upstream 10433 2057860 ~ 2058137 (+) True G252058
TU285985 lncRNA upstream 57891 2008538 ~ 2010679 (+) True G251941
TU285982 lncRNA upstream 151085 1914261 ~ 1917485 (+) True G251939
TU286045 lncRNA upstream 161541 1906432 ~ 1907029 (+) True G251999
TU285970 lncRNA upstream 185857 1880408 ~ 1882713 (+) True G251931
TU286116 lncRNA downstream 40207 2111043 ~ 2111419 (+) True G252067
TU286118 lncRNA downstream 41144 2111980 ~ 2112225 (+) True G252069
TU286123 lncRNA downstream 51898 2122734 ~ 2123208 (+) True G252072
TU286125 lncRNA downstream 53128 2123964 ~ 2124297 (+) True G252074
TU286126 lncRNA downstream 54253 2125089 ~ 2125293 (+) True G252075
CI01000059_01985427_01999889.mRNA mRNA upstream 68632 1985427 ~ 1999938 (+) True CI01000059_01985427_01999889
CI01000059_01893067_01914170.mRNA mRNA upstream 154324 1893067 ~ 1914246 (+) True CI01000059_01893067_01914170
CI01000059_01831592_01831849.mRNA mRNA upstream 234976 1830892 ~ 1833594 (+) True CI01000059_01831592_01831849
CI01000059_01443666_01454016.mRNA mRNA upstream 614554 1443666 ~ 1454016 (+) True CI01000059_01443666_01454016
CI01000059_01437393_01441869.mRNA mRNA upstream 625289 1436230 ~ 1443281 (+) True CI01000059_01437393_01441869
CI01000059_02087382_02094472.mRNA mRNA downstream 16499 2087335 ~ 2095736 (+) True CI01000059_02087382_02094472
CI01000059_02100931_02106420.mRNA mRNA downstream 30095 2100931 ~ 2106420 (+) True CI01000059_02100931_02106420
CI01000059_02133197_02134625.mRNA mRNA downstream 62167 2133003 ~ 2135347 (+) False CI01000059_02133197_02134625
CI01000059_02199027_02200947.mRNA mRNA downstream 128127 2198963 ~ 2201185 (+) True CI01000059_02199027_02200947
CI01000059_02213426_02223792.mRNA mRNA downstream 142590 2213426 ~ 2224014 (+) True CI01000059_02213426_02223792
TU285191 other upstream 407180 1627766 ~ 1661390 (+) True G251249
TU284915 other upstream 1001213 1064869 ~ 1067357 (+) True G251017
TU284955 other upstream 1089352 978741 ~ 979218 (+) False G251046
TU285978 other downstream 60656 2131492 ~ 2131636 (+) True G251935
TU286863 other downstream 1131903 3202739 ~ 3203091 (+) True G252732
TU287891 other downstream 3166923 5237759 ~ 5238233 (+) True G253654
TU289048 other downstream 4189207 6260043 ~ 6261633 (+) True G254692
TU289941 other downstream 5374106 7444942 ~ 7450195 (+) True G255434

Expression Profile