RNA id: CI01000072_04831647_04834194.mRNA



Basic Information


Item Value
RNA id CI01000072_04831647_04834194.mRNA
length 900
RNA type mRNA
GC content 0.43
exon number 2
gene id CI01000072_04831647_04834194
representative False

Chromosome Information


Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 4831557 ~ 4834707 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTATAAAACAAAATAGCTTACTGTTAAAAGCAGTTTCTCGCCAGTGAATGTAGTTGTGTGCTTGGTTTGTTCTCAACGGAATGGCGTACCATGCACGTTGTGCGTATGGTCTTTCGATTCACGATTGCGTTTTACGTATCTGGAGGATTCTGCCTCAACGGAAATGATGTGTGTTTACGAAACCGAACGGGAAATGGAGTGGGCTCCTCCGGTGTTTACCCCGGGAATGTCGAGGACAGGATGCTGAAGCCTAGAGGAAGCCCTGACGGCAGACTCTCAGCGCTCGGATCGGCTCAGTGTCAGGGAACTTATAATTATAGTGCACATCTGGCTGTGAGACAAGTCCTGGACTCCCTTTACACATCTATAACGACTCTCTGTTTTTAGCGACGGGTAAATTCTACAACAGCCTGATTTACTTCATCTTTCTCTGTTTATATCTCATCGTTTATGAATATCGTCCCTCTTTCTTCTGTATCCAAACAGAGCAGAAGCACCAGTGAGGGTTGAAGCGCCCCTCACAACAGAGTGGCTGCTAGTGAAGAAGGACACTCATACAAAGTCACAGAGACACATCATGATGGAGCTCCAGATCCAGCTAATACCCACAGGAGAAATCATACTGCCTCCAGGGAAAAATGGAGAGATTTATTGCCAAAGCTGCAATAAGGTAAGTCGCTTTAGATAAAAGCTCCTGCTAAATGAATAAGTGTCAATCTAAGATAAGAACAGACTCTGCAAATATATCAAAAGCTAATTTGCATAATTTGTGAATATAGCTGTCAGGATGTTTTGTGCTCAACAAAGCATGCCGTAGATTTGCATGCCCTAAAACTGAGGCTCATTAGAATTTTCCATGCTGTAAGCAAGATCTTGATTGTCAGCATATGCTTGTTTATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU324883 lncRNA upstream 25675 4805678 ~ 4805882 (+) True G286595
TU324973 lncRNA upstream 61164 4770107 ~ 4770393 (+) True G286676
TU324972 lncRNA upstream 62255 4769047 ~ 4769302 (+) True G286675
TU324847 lncRNA upstream 82770 4748406 ~ 4748787 (+) True CI01000072_04738344_04748841
TU324946 lncRNA upstream 205206 4623612 ~ 4626351 (+) False G286651
TU324861 lncRNA downstream 68273 4902980 ~ 4906118 (+) True G286573
TU324993 lncRNA downstream 153666 4988373 ~ 4990194 (+) True CI01000072_04974135_04987086
TU324995 lncRNA downstream 156654 4991361 ~ 4991885 (+) True G286695
TU325032 lncRNA downstream 198833 5033540 ~ 5033825 (+) True G286722
TU325043 lncRNA downstream 217341 5052048 ~ 5052262 (+) True G286732
CI01000072_04790857_04794136.mRNA mRNA upstream 37163 4789971 ~ 4794394 (+) True CI01000072_04790857_04794136
CI01000072_04778819_04782897.mRNA mRNA upstream 48110 4778819 ~ 4783447 (+) True CI01000072_04778819_04782897
CI01000072_04757636_04762507.mRNA mRNA upstream 69050 4757583 ~ 4762507 (+) False CI01000072_04757636_04762507
CI01000072_04738344_04748841.mRNA mRNA upstream 82656 4738291 ~ 4748901 (+) False CI01000072_04738344_04748841
CI01000072_04721539_04727645.mRNA mRNA upstream 103819 4721114 ~ 4727738 (+) True CI01000072_04721539_04727645
CI01000072_04852708_04855831.mRNA mRNA downstream 17727 4852434 ~ 4855921 (+) True CI01000072_04852708_04855831
CI01000072_04861662_04880150.mRNA mRNA downstream 26955 4861662 ~ 4880460 (+) True CI01000072_04861662_04880150
CI01000072_04883669_04888061.mRNA mRNA downstream 48962 4883669 ~ 4889286 (+) True CI01000072_04883669_04888061
CI01000072_04891865_04915635.mRNA mRNA downstream 57158 4891865 ~ 4915686 (+) True CI01000072_04891865_04915635
CI01000072_04924865_04927684.mRNA mRNA downstream 90158 4924865 ~ 4928530 (+) True CI01000072_04924865_04927684
TU324852 other upstream 28609 4802453 ~ 4802948 (+) True G286564
TU324804 other upstream 69047 4760311 ~ 4762510 (+) True CI01000072_04757636_04762507
TU324695 other upstream 488291 4338719 ~ 4343266 (+) True CI01000072_04338747_04342064
TU324694 other upstream 488374 4338719 ~ 4343183 (+) False CI01000072_04338747_04342064
TU324705 other upstream 599136 4232318 ~ 4232421 (+) False G286474

Expression Profile