RNA id: TU324015


Basic Information

Item Value
RNA id TU324015
length 323
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G285888
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 2069814 ~ 2070136 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGATGATTAAAGTGTTATCTTTCTTTACTGCGCGCCTCATCACGCGCTTCTGTCTTCCAGAGAGCCGCGCCCTCGCGTAATTCAAAAATTAACGGTCATTTCATTTTACTGACTGAAACATTTGTTTATCGATCGCTTTATTGAATAATTATTTATAATTAATACATGTACGAGTGTAAATAGTGTGATTTTAGAGACATTTGACACGTAATTGAAGACAACATTATGTTAACCGAGAAGTTTTTGTTTACCGACCAAAAGAGAGCGCGTCTCGCTAATTCAGTGGTAAGAAATTAATGTAATATTATCCCAGTTAAAGTCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU324014 lncRNA downstream 456 2069115 ~ 2069358 (-) True G285887
TU323880 lncRNA downstream 1454 1970371 ~ 2068360 (-) False G285755
TU323881 lncRNA downstream 1454 1999463 ~ 2068360 (-) True G285755
TU323878 lncRNA downstream 10816 2053423 ~ 2058998 (-) True G285753
TU323877 lncRNA downstream 14705 2053423 ~ 2055109 (-) False G285753
TU324030 lncRNA upstream 56941 2127077 ~ 2127391 (-) True G285903
TU323866 lncRNA upstream 115943 2186079 ~ 2186324 (-) True G285745
TU323862 lncRNA upstream 154142 2224278 ~ 2310012 (-) True G285741
TU324184 lncRNA upstream 289108 2359244 ~ 2359526 (-) True G286050
TU324185 lncRNA upstream 289551 2359687 ~ 2360866 (-) True G286051
CI01000072_02041267_02050950.mRNA mRNA downstream 16630 2040738 ~ 2053184 (-) True CI01000072_02041267_02050950
CI01000072_01987945_01988280.mRNA mRNA downstream 81041 1987274 ~ 1988773 (-) True CI01000072_01987945_01988280
CI01000072_01973002_01985111.mRNA mRNA downstream 84570 1972896 ~ 1985244 (-) True CI01000072_01973002_01985111
CI01000072_01946903_01949124.mRNA mRNA downstream 120690 1945288 ~ 1949124 (-) True CI01000072_01946903_01949124
CI01000072_01901888_01919435.mRNA mRNA downstream 150341 1900924 ~ 1919473 (-) False CI01000072_01901888_01919435
CI01000072_02074797_02106818.mRNA mRNA upstream 3851 2073987 ~ 2106873 (-) True CI01000072_02074797_02106818
CI01000072_02306739_02309704.mRNA mRNA upstream 236510 2306646 ~ 2309704 (-) True CI01000072_02306739_02309704
CI01000072_02400147_02401427.mRNA mRNA upstream 329633 2399769 ~ 2401427 (-) True CI01000072_02400147_02401427
CI01000072_02483888_02489835.mRNA mRNA upstream 413690 2483826 ~ 2489855 (-) True CI01000072_02483888_02489835
CI01000072_02497534_02504872.mRNA mRNA upstream 426973 2497109 ~ 2505039 (-) True CI01000072_02497534_02504872
TU323892 other downstream 61505 2005551 ~ 2008309 (-) True G285766
TU323812 other downstream 441919 1602289 ~ 1602443 (-) True G285697
TU323815 other downstream 441919 1594111 ~ 1627895 (-) True CI01000072_01596829_01610605
TU323625 other downstream 714882 1335507 ~ 1354932 (-) True G285534
TU322054 other downstream 1785535 283623 ~ 283764 (-) True G284127
TU323875 other upstream 97912 2168048 ~ 2170658 (-) True G285752
TU324139 other upstream 923633 2993769 ~ 2999495 (-) True G286005
TU324361 other upstream 1900134 3970270 ~ 3976002 (-) False G286205
TU324366 other upstream 1900134 3970270 ~ 3976067 (-) False G286205
TU324367 other upstream 1900134 3970270 ~ 3976002 (-) False G286205

Expression Profile